Variant report

Variant	rs11006575
Chromosome Location	chr10:61320716-61320717
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16913629	1.00[AMR][1000 genomes]
rs7070757	1.00[AMR][1000 genomes]
rs7901326	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895564	chr10:61220923-61327502	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv551150	chr10:61286904-61330297	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv3693063	chr10:61316344-61331087	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61313600-61320800	Weak transcription	Rectal Smooth Muscle	rectum
2	chr10:61316200-61321400	Enhancers	Fetal Lung	lung
3	chr10:61317600-61324000	Weak transcription	Fetal Muscle Leg	muscle
4	chr10:61318000-61321000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:61318200-61320800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr10:61319600-61322200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr10:61319800-61321000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr10:61320200-61320800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:61320200-61321000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr10:61320400-61320800	Flanking Active TSS	Fetal Heart	heart
11	chr10:61320400-61321200	Enhancers	NHDF-Ad	bronchial
12	chr10:61320600-61322400	Enhancers	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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