Variant report

Variant	rs11013092
Chromosome Location	chr10:18518876-18518877
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10828327	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013115	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12220312	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12221044	1.00[AFR][1000 genomes]
rs57557931	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59881007	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18511200-18520400	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr10:18514000-18522400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr10:18514000-18522800	Weak transcription	Esophagus	oesophagus
4	chr10:18514400-18524400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr10:18514400-18525600	Weak transcription	Fetal Lung	lung
6	chr10:18514400-18526600	Weak transcription	Rectal Smooth Muscle	rectum
7	chr10:18514600-18519000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr10:18515400-18522000	Weak transcription	Ovary	ovary
9	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr10:18516800-18524800	Weak transcription	Fetal Stomach	stomach
11	chr10:18517600-18520000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr10:18517800-18519800	Enhancers	HSMMtube	muscle
13	chr10:18518000-18521000	Enhancers	Muscle Satellite Cultured Cells	--
14	chr10:18518000-18521000	Enhancers	Osteobl	bone
15	chr10:18518200-18519200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr10:18518200-18520000	Enhancers	NH-A	brain
17	chr10:18518200-18520800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr10:18518200-18520800	Enhancers	NHDF-Ad	bronchial
19	chr10:18518400-18519200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr10:18518400-18519200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr10:18518400-18520800	Enhancers	NHLF	lung
22	chr10:18518800-18519400	Enhancers	Fetal Heart	heart
23	chr10:18518800-18519400	Enhancers	HSMM	muscle
24	chr10:18518800-18519600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr10:18518800-18519600	Enhancers	Colon Smooth Muscle	Colon
26	chr10:18518800-18519600	Enhancers	Fetal Kidney	kidney
27	chr10:18518800-18519600	Enhancers	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links