Variant report

Variant	rs11013429
Chromosome Location	chr10:23671290-23671291
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11013430	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11013455	0.82[EUR][1000 genomes]
rs12355434	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12358180	0.83[EUR][1000 genomes]
rs1511823	0.83[EUR][1000 genomes]
rs1511824	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1511826	1.00[ASN][1000 genomes]
rs1995980	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2365888	0.81[EUR][1000 genomes]
rs2886497	0.87[EUR][1000 genomes]
rs4287251	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7069826	1.00[ASN][1000 genomes]
rs72771410	0.82[EUR][1000 genomes]
rs7898036	0.83[EUR][1000 genomes]
rs7900459	0.83[EUR][1000 genomes]
rs7916749	0.84[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23664600-23672000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:23664600-23672000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr10:23664800-23672200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:23666400-23672200	Weak transcription	HMEC	breast
5	chr10:23670800-23673400	Weak transcription	Hela-S3	cervix
6	chr10:23671000-23679600	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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