Variant report

Variant	rs11014682
Chromosome Location	chr10:25980692-25980693
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12260110	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16926203	1.00[ASN][1000 genomes]
rs16926243	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16926251	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56405558	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57862921	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25962800-25993600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:25978400-25985600	Enhancers	Primary B cells from peripheral blood	blood
3	chr10:25979000-25983200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:25980200-25985600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr10:25980400-25980800	Weak transcription	Primary B cells from cord blood	blood
6	chr10:25980600-25980800	Enhancers	H9 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links