Variant report

Variant	rs11020382
Chromosome Location	chr11:93232464-93232465
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10501804	1.00[MEX][hapmap]
rs11499635	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv1039623	chr11:93141461-93328739	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	esv2760208	chr11:93172673-93266594	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases
4	nsv522568	chr11:93231137-93239907	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv516461	chr11:93231476-93240847	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93207000-93239000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr11:93209000-93235200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr11:93211000-93253400	Weak transcription	Primary T cells from cord blood	blood
4	chr11:93211600-93243800	Weak transcription	Fetal Thymus	thymus
5	chr11:93212200-93234800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr11:93214800-93234400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr11:93218600-93254400	Weak transcription	Hela-S3	cervix
8	chr11:93218800-93238200	Weak transcription	Esophagus	oesophagus
9	chr11:93218800-93245800	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr11:93220800-93235400	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr11:93222400-93238000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr11:93222800-93236000	Weak transcription	Fetal Muscle Trunk	muscle
13	chr11:93223000-93242800	Weak transcription	Adipose Nuclei	Adipose
14	chr11:93225400-93242800	Weak transcription	GM12878-XiMat	blood
15	chr11:93225600-93248800	Weak transcription	Fetal Muscle Leg	muscle
16	chr11:93225800-93232800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr11:93226000-93235000	Weak transcription	Small Intestine	intestine
18	chr11:93226400-93257400	Weak transcription	Rectal Mucosa Donor 29	rectum
19	chr11:93226600-93238000	Weak transcription	Fetal Lung	lung
20	chr11:93226800-93233600	Weak transcription	Stomach Mucosa	stomach
21	chr11:93227000-93234600	Weak transcription	Gastric	stomach
22	chr11:93227000-93243800	Weak transcription	Lung	lung
23	chr11:93227200-93257600	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr11:93227400-93239800	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr11:93227600-93232800	Strong transcription	Fetal Stomach	stomach
26	chr11:93227800-93235000	Weak transcription	Pancreas	Pancrea
27	chr11:93228200-93234000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr11:93228200-93243400	Weak transcription	Right Ventricle	heart
29	chr11:93228200-93248200	Weak transcription	Brain Hippocampus Middle	brain
30	chr11:93228400-93235000	Weak transcription	HepG2	liver
31	chr11:93228400-93237800	Weak transcription	Osteobl	bone
32	chr11:93229200-93232600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr11:93229800-93235000	Weak transcription	Duodenum Mucosa	Duodenum
34	chr11:93230000-93232800	Enhancers	Primary monocytes fromperipheralblood	blood
35	chr11:93230400-93232800	Enhancers	HUES6 Cell Line	embryonic stem cell
36	chr11:93230400-93233000	Enhancers	iPS-20b Cell Line	embryonic stem cell
37	chr11:93230400-93233200	Enhancers	iPS-15b Cell Line	embryonic stem cell
38	chr11:93230600-93232800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr11:93230600-93232800	Enhancers	H9 Cell Line	embryonic stem cell
40	chr11:93230600-93232800	Enhancers	Fetal Intestine Large	intestine
41	chr11:93230600-93232800	Genic enhancers	Fetal Intestine Small	intestine
42	chr11:93230600-93233400	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr11:93230600-93234200	Enhancers	H1 Cell Line	embryonic stem cell
44	chr11:93230600-93234200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr11:93230800-93233000	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chr11:93230800-93233400	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr11:93231000-93232600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
48	chr11:93231000-93236600	Weak transcription	Dnd41	blood
49	chr11:93231400-93232600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr11:93231600-93232600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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