Variant report

Variant	rs11032515
Chromosome Location	chr11:34129394-34129395
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:34129280-34129430	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr11:34129373-34129508	K562	blood:	n/a	n/a

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:34125543..34130810-chr11:34377372..34382966,13	MCF-7	breast:
2	chr11:34126304..34129768-chr11:34376546..34381116,4	MCF-7	breast:
3	chr11:34112370..34115076-chr11:34127072..34129941,3	K562	blood:
4	chr11:34068673..34076707-chr11:34122442..34129826,21	K562	blood:
5	chr11:34071305..34076629-chr11:34124370..34130035,10	MCF-7	breast:
6	chr11:34070943..34077471-chr11:34125498..34130034,9	MCF-7	breast:
7	chr11:34112088..34115076-chr11:34127034..34129941,2	K562	blood:

No data

Variant related genes	Relation type
NAT10	TF binding region
ENSG00000166016	Chromatin interaction
ENSG00000135387	Chromatin interaction

rs_ID	r²[population]
rs10836156	0.96[ASN][1000 genomes]
rs12421526	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34127800-34131200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:34128000-34129800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:34128000-34129800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr11:34128000-34129800	Weak transcription	Small Intestine	intestine
5	chr11:34128000-34130000	Weak transcription	Aorta	Aorta
6	chr11:34128000-34131800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:34128000-34133200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr11:34128000-34168000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr11:34128200-34129400	Enhancers	Liver	Liver
10	chr11:34128200-34129400	Flanking Active TSS	Hela-S3	cervix
11	chr11:34128200-34129600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
12	chr11:34128200-34129600	Weak transcription	Fetal Muscle Trunk	muscle
13	chr11:34128200-34129600	Weak transcription	Placenta	Placenta
14	chr11:34128200-34129800	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr11:34128200-34130000	Weak transcription	Colonic Mucosa	Colon
16	chr11:34128200-34131000	Weak transcription	Spleen	Spleen
17	chr11:34128200-34131200	Weak transcription	Gastric	stomach
18	chr11:34128200-34132800	Weak transcription	Fetal Brain Male	brain
19	chr11:34128200-34169800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr11:34128400-34129400	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr11:34128400-34129600	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr11:34128400-34129600	Weak transcription	Thymus	Thymus
23	chr11:34128400-34129800	Weak transcription	Primary monocytes fromperipheralblood	blood
24	chr11:34128400-34129800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr11:34128400-34129800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr11:34128400-34129800	Weak transcription	Brain Angular Gyrus	brain
27	chr11:34128400-34129800	Weak transcription	Brain Hippocampus Middle	brain
28	chr11:34128400-34129800	Enhancers	Brain Inferior Temporal Lobe	brain
29	chr11:34128400-34129800	Weak transcription	Brain Substantia Nigra	brain
30	chr11:34128400-34129800	Weak transcription	Fetal Intestine Large	intestine
31	chr11:34128400-34129800	Weak transcription	Right Ventricle	heart
32	chr11:34128400-34129800	Weak transcription	Monocytes-CD14+_RO01746	blood
33	chr11:34128400-34130000	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr11:34128400-34130000	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr11:34128400-34130200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr11:34128400-34130400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
37	chr11:34128400-34130400	Weak transcription	Rectal Smooth Muscle	rectum
38	chr11:34128400-34130600	Weak transcription	Fetal Kidney	kidney
39	chr11:34128400-34130800	Weak transcription	Primary neutrophils fromperipheralblood	blood
40	chr11:34128400-34131400	Weak transcription	Fetal Intestine Small	intestine
41	chr11:34128600-34129400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr11:34128600-34129400	Enhancers	Lung	lung
43	chr11:34128600-34129600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr11:34128600-34129600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr11:34128600-34129600	Weak transcription	Brain Anterior Caudate	brain
46	chr11:34128600-34129600	Weak transcription	Colon Smooth Muscle	Colon
47	chr11:34128600-34129600	Weak transcription	Fetal Brain Female	brain
48	chr11:34128600-34129800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr11:34128600-34129800	Weak transcription	Primary T cells from cord blood	blood
50	chr11:34128600-34129800	Weak transcription	Brain Cingulate Gyrus	brain

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