Variant report

Variant	rs11038750
Chromosome Location	chr11:46063034-46063035
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:46061076..46063761-chr11:46075337..46077557,2	K562	blood:
2	chr11:46058683..46060346-chr11:46062032..46063868,2	K562	blood:
3	chr11:46060552..46062778-chr11:46063015..46065968,2	MCF-7	breast:
4	chr11:46060718..46063384-chr11:46065101..46066881,3	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11038747	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11038755	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11038756	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11038757	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11038764	0.92[EUR][1000 genomes]
rs12362172	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs12363382	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1490088	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs4536183	0.87[YRI][hapmap]

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46001400-46070400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr11:46022000-46074600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr11:46039200-46077200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:46039400-46096800	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr11:46041000-46066200	Weak transcription	Liver	Liver
6	chr11:46041000-46071000	Weak transcription	Placenta	Placenta
7	chr11:46041200-46070800	Weak transcription	Thymus	Thymus
8	chr11:46041400-46086600	Weak transcription	Fetal Intestine Large	intestine
9	chr11:46042000-46065000	Weak transcription	Pancreas	Pancrea
10	chr11:46042000-46071000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr11:46042000-46071000	Weak transcription	Brain Angular Gyrus	brain
12	chr11:46043200-46071000	Weak transcription	Lung	lung
13	chr11:46043200-46086800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr11:46044400-46071000	Weak transcription	Fetal Muscle Trunk	muscle
15	chr11:46044400-46071200	Weak transcription	Fetal Intestine Small	intestine
16	chr11:46045000-46070600	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr11:46045000-46087000	Weak transcription	Hela-S3	cervix
18	chr11:46048000-46070400	Weak transcription	Primary B cells from peripheral blood	blood
19	chr11:46048600-46070600	Weak transcription	Fetal Muscle Leg	muscle
20	chr11:46048800-46063800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr11:46049200-46071000	Weak transcription	Fetal Brain Male	brain
22	chr11:46049200-46078800	Weak transcription	Aorta	Aorta
23	chr11:46049400-46067200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr11:46049400-46068400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr11:46049400-46071000	Weak transcription	HSMM	muscle
26	chr11:46049600-46069200	Weak transcription	HSMMtube	muscle
27	chr11:46053200-46071000	Weak transcription	Gastric	stomach
28	chr11:46055400-46066200	Weak transcription	Rectal Mucosa Donor 31	rectum
29	chr11:46055400-46070400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr11:46056400-46067600	Weak transcription	Psoas Muscle	Psoas
31	chr11:46057400-46071000	Weak transcription	NHDF-Ad	bronchial
32	chr11:46057600-46063600	Weak transcription	Primary monocytes fromperipheralblood	blood
33	chr11:46059200-46071000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr11:46060600-46067600	Weak transcription	Left Ventricle	heart
35	chr11:46061000-46063800	Weak transcription	Monocytes-CD14+_RO01746	blood
36	chr11:46061600-46068600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr11:46061800-46063600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
38	chr11:46061800-46064800	Weak transcription	Primary B cells from cord blood	blood
39	chr11:46061800-46067200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr11:46061800-46070600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
41	chr11:46061800-46070600	Weak transcription	Fetal Stomach	stomach
42	chr11:46062000-46063200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
43	chr11:46062000-46063200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
44	chr11:46062000-46063200	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr11:46062000-46063400	Weak transcription	NH-A	brain
46	chr11:46062000-46063600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
47	chr11:46062000-46064000	Enhancers	Primary T helper cells PMA-I stimulated	--
48	chr11:46062000-46070600	Weak transcription	Colon Smooth Muscle	Colon
49	chr11:46062000-46100800	Weak transcription	Brain Cingulate Gyrus	brain
50	chr11:46062200-46066600	Weak transcription	Ovary	ovary

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