Variant report
| Variant | rs11054741 |
|---|---|
| Chromosome Location | chr12:12397897-12397898 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12368400-12417200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 2 | chr12:12377800-12407200 | Weak transcription | NH-A | brain |
| 3 | chr12:12384800-12417200 | Weak transcription | K562 | blood |
| 4 | chr12:12385000-12404000 | Weak transcription | Lung | lung |
| 5 | chr12:12385000-12417800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 6 | chr12:12385200-12409200 | Weak transcription | Pancreas | Pancrea |
| 7 | chr12:12390000-12416600 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr12:12390400-12398800 | Weak transcription | Fetal Muscle Leg | muscle |
| 9 | chr12:12390400-12400400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 10 | chr12:12390800-12417800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 11 | chr12:12391200-12399600 | Weak transcription | HSMM | muscle |
| 12 | chr12:12392200-12403000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 13 | chr12:12392400-12407800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 14 | chr12:12392600-12408200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 15 | chr12:12392800-12399800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr12:12393200-12405000 | Weak transcription | HUVEC | blood vessel |
| 17 | chr12:12393400-12399400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 18 | chr12:12393800-12399000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 19 | chr12:12394200-12400600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 20 | chr12:12394200-12407200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 21 | chr12:12394200-12407200 | Weak transcription | Osteobl | bone |
| 22 | chr12:12394200-12416800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 23 | chr12:12394200-12417400 | Weak transcription | Fetal Kidney | kidney |
| 24 | chr12:12394400-12401000 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr12:12394600-12407600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 26 | chr12:12394800-12405800 | Weak transcription | HMEC | breast |
| 27 | chr12:12394800-12407600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 28 | chr12:12394800-12417400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 29 | chr12:12395200-12407200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 30 | chr12:12395600-12398200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 31 | chr12:12395600-12399400 | Weak transcription | Fetal Brain Female | brain |
| 32 | chr12:12395600-12409200 | Weak transcription | Ovary | ovary |
| 33 | chr12:12395600-12417400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 34 | chr12:12395800-12398400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 35 | chr12:12395800-12406600 | Weak transcription | Brain Germinal Matrix | brain |
| 36 | chr12:12396000-12398200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 37 | chr12:12396000-12407400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 38 | chr12:12396400-12398000 | Active TSS | Brain Cingulate Gyrus | brain |
| 39 | chr12:12397000-12399200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 40 | chr12:12397000-12403600 | Weak transcription | Fetal Intestine Small | intestine |
| 41 | chr12:12397000-12408400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 42 | chr12:12397200-12399200 | Weak transcription | HSMMtube | muscle |
| 43 | chr12:12397200-12399800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 44 | chr12:12397400-12398000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr12:12397400-12399200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 46 | chr12:12397400-12399200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 47 | chr12:12397400-12403200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 48 | chr12:12397400-12409600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 49 | chr12:12397600-12398000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr12:12397600-12398000 | Flanking Active TSS | Brain Inferior Temporal Lobe | brain |
