Variant report
| Variant | rs11054963 |
|---|---|
| Chromosome Location | chr12:12693725-12693726 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12686600-12701000 | Weak transcription | HSMM | muscle |
| 2 | chr12:12686600-12703200 | Weak transcription | NH-A | brain |
| 3 | chr12:12686600-12708000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 4 | chr12:12686600-12711400 | Weak transcription | Esophagus | oesophagus |
| 5 | chr12:12686800-12712200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr12:12686800-12712600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr12:12687200-12693800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 8 | chr12:12687200-12698400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 9 | chr12:12687200-12708000 | Weak transcription | Right Ventricle | heart |
| 10 | chr12:12687200-12711600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 11 | chr12:12687200-12712600 | Weak transcription | Aorta | Aorta |
| 12 | chr12:12687400-12694000 | Weak transcription | Fetal Stomach | stomach |
| 13 | chr12:12687400-12694200 | Weak transcription | Placenta | Placenta |
| 14 | chr12:12687400-12706400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr12:12687400-12708000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 16 | chr12:12687400-12708000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 17 | chr12:12687400-12710600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 18 | chr12:12687400-12712600 | Weak transcription | K562 | blood |
| 19 | chr12:12688200-12694000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 20 | chr12:12688200-12710800 | Weak transcription | Pancreas | Pancrea |
| 21 | chr12:12688200-12714400 | Weak transcription | Gastric | stomach |
| 22 | chr12:12688400-12695600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 23 | chr12:12689400-12694200 | Weak transcription | HepG2 | liver |
| 24 | chr12:12689600-12708000 | Weak transcription | Ovary | ovary |
| 25 | chr12:12690600-12712600 | Weak transcription | NHLF | lung |
| 26 | chr12:12690800-12697400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 27 | chr12:12690800-12710400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr12:12691000-12694200 | Genic enhancers | Fetal Intestine Small | intestine |
| 29 | chr12:12691400-12693800 | Enhancers | Stomach Mucosa | stomach |
| 30 | chr12:12691600-12694400 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 31 | chr12:12691800-12700800 | Weak transcription | Psoas Muscle | Psoas |
| 32 | chr12:12692000-12696000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 33 | chr12:12692000-12700600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr12:12692000-12713000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr12:12692200-12694000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr12:12692400-12700600 | Weak transcription | Brain Hippocampus Middle | brain |
| 37 | chr12:12692400-12713600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 38 | chr12:12692600-12695800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr12:12692600-12695800 | Weak transcription | A549 | lung |
| 40 | chr12:12692600-12701800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 41 | chr12:12692600-12702200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 42 | chr12:12692600-12702200 | Weak transcription | Brain Substantia Nigra | brain |
| 43 | chr12:12692600-12708000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 44 | chr12:12692600-12708000 | Weak transcription | Small Intestine | intestine |
| 45 | chr12:12692800-12693800 | Genic enhancers | Fetal Intestine Large | intestine |
| 46 | chr12:12692800-12694000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 47 | chr12:12692800-12694200 | Enhancers | Spleen | Spleen |
| 48 | chr12:12693000-12694400 | Enhancers | Primary T cells fromperipheralblood | blood |
| 49 | chr12:12693000-12700600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 50 | chr12:12693200-12694000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
