Variant report

Variant	rs11064762
Chromosome Location	chr12:119811323-119811324
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11064775	1.00[AFR][1000 genomes]
rs11064786	1.00[AFR][1000 genomes]
rs7304132	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047036	chr12:119477583-119992640	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv899552	chr12:119733874-119814623	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv916688	chr12:119801814-120044407	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119807600-119812800	Weak transcription	Placenta	Placenta
2	chr12:119807800-119812800	Enhancers	Fetal Heart	heart
3	chr12:119808400-119812800	Weak transcription	Right Atrium	heart
4	chr12:119810000-119813200	Weak transcription	Fetal Thymus	thymus
5	chr12:119810000-119814400	Enhancers	Fetal Lung	lung
6	chr12:119810200-119811400	Enhancers	GM12878-XiMat	blood
7	chr12:119810400-119811400	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr12:119810400-119811400	Enhancers	Colon Smooth Muscle	Colon
9	chr12:119810400-119812600	Weak transcription	Right Ventricle	heart
10	chr12:119810800-119811400	Enhancers	Esophagus	oesophagus
11	chr12:119811000-119812200	Enhancers	Left Ventricle	heart
12	chr12:119811200-119811400	Enhancers	Fetal Stomach	stomach
13	chr12:119811200-119811400	Enhancers	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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