Variant report

Variant	rs11083740
Chromosome Location	chr19:45058040-45058041
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1441617	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062812	chr19:45042262-45214796	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:45055600-45058200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr19:45056800-45058200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr19:45057200-45058400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr19:45057400-45058200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr19:45057400-45058400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr19:45057400-45058400	Enhancers	HMEC	breast
7	chr19:45057600-45058200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr19:45057600-45058200	Enhancers	K562	blood
9	chr19:45057600-45058400	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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