Variant report

Variant rs11084626
Chromosome Location chr19:28225988-28225989
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28215800-28228400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr19:28216000-28235800 Weak transcription HSMM muscle
3 chr19:28217000-28237600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr19:28217600-28229800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
5 chr19:28218000-28226800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr19:28218600-28228400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr19:28218600-28235600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr19:28218800-28227000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
9 chr19:28219400-28228200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr19:28220200-28238000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr19:28220200-28238000 Weak transcription HMEC breast
12 chr19:28220600-28231000 Weak transcription Right Ventricle heart
13 chr19:28220800-28237800 Weak transcription Brain Cingulate Gyrus brain
14 chr19:28222000-28227800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr19:28222600-28229400 Weak transcription Brain Hippocampus Middle brain
16 chr19:28223400-28236200 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr19:28223400-28237000 Weak transcription Brain Angular Gyrus brain
18 chr19:28223600-28238200 ZNF genes & repeats Brain Germinal Matrix brain
19 chr19:28223600-28238800 ZNF genes & repeats Fetal Brain Female brain
20 chr19:28223800-28237800 Weak transcription Primary B cells from cord blood blood
21 chr19:28224200-28231200 Strong transcription Ovary ovary
22 chr19:28224200-28232800 Weak transcription Colon Smooth Muscle Colon
23 chr19:28224200-28233000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr19:28224200-28235800 Strong transcription Stomach Smooth Muscle stomach
25 chr19:28224200-28238200 ZNF genes & repeats Aorta Aorta
26 chr19:28224400-28227800 Weak transcription Adipose Nuclei Adipose
27 chr19:28224400-28229800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr19:28224600-28226000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr19:28224600-28226200 ZNF genes & repeats A549 lung
30 chr19:28224600-28230200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr19:28224600-28230400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:28224600-28234400 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr19:28225000-28226600 ZNF genes & repeats Fetal Stomach stomach
34 chr19:28225200-28226000 Weak transcription Left Ventricle heart
35 chr19:28225200-28232600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr19:28225200-28238000 Weak transcription Liver Liver
37 chr19:28225400-28231000 Weak transcription Psoas Muscle Psoas
38 chr19:28225400-28233000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr19:28225400-28237000 Weak transcription Brain Substantia Nigra brain
40 chr19:28225600-28230800 Weak transcription Fetal Heart heart
41 chr19:28225800-28227200 Enhancers HSMMtube muscle
42 chr19:28225800-28233200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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