Variant report

Variant	rs11100607
Chromosome Location	chr4:166278226-166278227
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs6536909	0.88[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7696111	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847399	chr4:166259587-166284836	Strong transcription Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166263200-166280400	Weak transcription	Adipose Nuclei	Adipose
2	chr4:166277400-166278400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr4:166277400-166279800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr4:166277400-166280400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr4:166277400-166280400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr4:166277600-166280800	Weak transcription	Fetal Lung	lung
7	chr4:166277600-166285400	Weak transcription	HepG2	liver
8	chr4:166277800-166279400	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr4:166278200-166282800	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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