Variant report

Variant	rs111264868
Chromosome Location	chr11:34071925-34071926
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:11)
CpG islands
(count:0)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:11 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RCOR1	chr11:34071864-34072016	K562	blood:	n/a	n/a
2	ZMIZ1	chr11:34071826-34071949	K562	blood:	n/a	n/a
3	TBL1XR1	chr11:34071837-34072024	K562	blood:	n/a	n/a
4	USF2	chr11:34071869-34071956	K562	blood:	n/a	n/a
5	POLR2A	chr11:34071825-34075659	GM12891	blood:	n/a	n/a
6	POLR2A	chr11:34071900-34075767	SK-N-MC	brain:	n/a	n/a
7	POLR2A	chr11:34070322-34075592	SK-N-MC	brain:	n/a	n/a
8	POLR2A	chr11:34071634-34072212	GM12878	blood:	n/a	n/a
9	POLR2A	chr11:34071827-34072195	K562	blood:	n/a	n/a
10	POLR2A	chr11:34071865-34072019	K562	blood:	n/a	n/a
11	POLR2A	chr11:34071426-34076005	K562	blood:	n/a	n/a

No data

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:34042157..34043774-chr11:34070520..34073015,2	MCF-7	breast:
2	chr11:34068673..34076707-chr11:34122442..34129826,21	K562	blood:
3	chr11:34070943..34077471-chr11:34125498..34130034,9	MCF-7	breast:
4	chr11:34071305..34076629-chr11:34124370..34130035,10	MCF-7	breast:

No data

Variant related genes	Relation type
CAPRIN1	TF binding region
ENSG00000135372	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3424593	chr11:34071901-34074749	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34066400-34072600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:34066800-34072000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr11:34066800-34072200	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr11:34067000-34072000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:34067000-34072200	Weak transcription	GM12878-XiMat	blood
6	chr11:34067000-34072400	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr11:34067200-34072000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr11:34067200-34072000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr11:34067200-34072000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr11:34067200-34072000	Weak transcription	Stomach Mucosa	stomach
11	chr11:34067200-34072400	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr11:34067200-34072600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr11:34067400-34072000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr11:34067400-34072000	Weak transcription	HUES64 Cell Line	embryonic stem cell
15	chr11:34067400-34072200	Weak transcription	HUVEC	blood vessel
16	chr11:34067600-34072000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr11:34067600-34072000	Weak transcription	A549	lung
18	chr11:34067800-34072200	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr11:34068200-34072200	Weak transcription	Fetal Brain Male	brain
20	chr11:34070400-34072000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr11:34070600-34072600	Enhancers	Placenta	Placenta
22	chr11:34071200-34072200	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr11:34071200-34072200	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chr11:34071600-34072000	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr11:34071600-34072200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr11:34071600-34072200	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr11:34071600-34072200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr11:34071600-34072200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr11:34071600-34072200	Enhancers	HepG2	liver
30	chr11:34071600-34072200	Enhancers	NHEK	skin
31	chr11:34071600-34072400	Enhancers	Breast Myoepithelial Primary Cells	Breast
32	chr11:34071600-34072400	Enhancers	Adipose Nuclei	Adipose
33	chr11:34071600-34072400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
34	chr11:34071600-34072400	Enhancers	Fetal Intestine Small	intestine
35	chr11:34071600-34072400	Enhancers	HSMMtube	muscle
36	chr11:34071600-34072400	Enhancers	Osteobl	bone
37	chr11:34071800-34072000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr11:34071800-34072000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
39	chr11:34071800-34072000	Active TSS	iPS-18 Cell Line	embryonic stem cell
40	chr11:34071800-34072000	Enhancers	Muscle Satellite Cultured Cells	--
41	chr11:34071800-34072000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr11:34071800-34072000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr11:34071800-34072000	Enhancers	Aorta	Aorta
44	chr11:34071800-34072000	Enhancers	Esophagus	oesophagus
45	chr11:34071800-34072000	Enhancers	Right Atrium	heart
46	chr11:34071800-34072000	Enhancers	Stomach Smooth Muscle	stomach
47	chr11:34071800-34072000	Enhancers	Dnd41	blood
48	chr11:34071800-34072200	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr11:34071800-34072200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr11:34071800-34072200	Enhancers	Primary hematopoietic stem cells	blood

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