Variant report

Variant	rs11127010
Chromosome Location	chr2:86176194-86176195
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10181091	0.87[AMR][1000 genomes]
rs10460588	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11127011	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12473456	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12714161	0.87[AMR][1000 genomes]
rs13397189	0.87[AMR][1000 genomes]
rs4832227	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6713002	0.87[AMR][1000 genomes]
rs6714363	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6728146	0.85[AMR][1000 genomes]
rs6756342	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11127010	MRPL35	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86172800-86176200	Weak transcription	HepG2	liver
2	chr2:86175000-86183600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr2:86175800-86177600	Enhancers	Pancreas	Pancrea
4	chr2:86175800-86180600	Enhancers	Liver	Liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links