Variant report

Variant rs111277220
Chromosome Location chr6:36625850-36625851
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:36611600-36628600 Weak transcription Right Atrium heart
2 chr6:36618200-36627400 Weak transcription Left Ventricle heart
3 chr6:36619400-36628400 Weak transcription Adipose Nuclei Adipose
4 chr6:36620200-36628000 Weak transcription Colonic Mucosa Colon
5 chr6:36620200-36628600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:36620400-36626200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:36621800-36626000 Enhancers Thymus Thymus
8 chr6:36622000-36626200 Enhancers Fetal Thymus thymus
9 chr6:36622200-36628600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr6:36622400-36628800 Enhancers GM12878-XiMat blood
11 chr6:36623200-36628600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr6:36623400-36626000 Weak transcription Fetal Heart heart
13 chr6:36623400-36628800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr6:36623600-36626200 Weak transcription Primary B cells from cord blood blood
15 chr6:36624600-36627800 Enhancers Placenta Placenta
16 chr6:36624600-36628800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr6:36624800-36627400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr6:36625000-36626200 Enhancers Fetal Intestine Large intestine
19 chr6:36625000-36627600 Enhancers Rectal Smooth Muscle rectum
20 chr6:36625000-36628000 Enhancers Osteobl bone
21 chr6:36625000-36628200 Enhancers Colon Smooth Muscle Colon
22 chr6:36625000-36628800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:36625200-36627000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr6:36625200-36627200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr6:36625200-36627800 Enhancers HMEC breast
26 chr6:36625400-36626200 Enhancers Fetal Stomach stomach
27 chr6:36625400-36627400 Enhancers NHEK skin
28 chr6:36625600-36626400 Enhancers Primary B cells from peripheral blood blood
29 chr6:36625600-36626400 Enhancers NH-A brain
30 chr6:36625600-36627600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:36625600-36627600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:36625600-36627600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:36625600-36627600 Enhancers Muscle Satellite Cultured Cells --
34 chr6:36625600-36627800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:36625600-36627800 Enhancers HSMM muscle
36 chr6:36625600-36628000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr6:36625600-36628400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr6:36625600-36628800 Enhancers NHDF-Ad bronchial
39 chr6:36625800-36626000 Enhancers Small Intestine intestine
40 chr6:36625800-36626400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr6:36625800-36627400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:36625800-36627800 Enhancers HSMMtube muscle
43 chr6:36625800-36628000 Weak transcription Fetal Intestine Small intestine
44 chr6:36625800-36628400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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