The 2.0 version of rSNPBase

Variant report

Variant rs11136454
Chromosome Location chr8:1956515-1956516
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:1949800-1956800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr8:1950600-1957200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr8:1950600-1958200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr8:1951600-1958800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr8:1954200-1957400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr8:1954200-1957400 Strong transcription Fetal Intestine Small intestine
7 chr8:1954400-1957400 Weak transcription Primary T cells from cord blood blood
8 chr8:1954400-1958600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr8:1954400-1960200 Weak transcription Fetal Thymus thymus
10 chr8:1954600-1956600 Strong transcription Brain Germinal Matrix brain
11 chr8:1954600-1958600 Weak transcription Brain Anterior Caudate brain
12 chr8:1955000-1956600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr8:1955000-1956800 Genic enhancers Fetal Muscle Leg muscle
14 chr8:1955000-1957000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr8:1955200-1959200 Weak transcription Fetal Kidney kidney
16 chr8:1955600-1958000 Weak transcription Pancreas Pancrea
17 chr8:1955600-1959600 Weak transcription Fetal Intestine Large intestine
18 chr8:1955600-1960200 Enhancers Primary monocytes fromperipheralblood blood
19 chr8:1955800-1956600 Enhancers Lung lung
20 chr8:1955800-1957000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr8:1955800-1957000 Enhancers Spleen Spleen
22 chr8:1955800-1957400 Enhancers Primary neutrophils fromperipheralblood blood
23 chr8:1956000-1958200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr8:1956000-1958800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr8:1956000-1958800 Weak transcription Brain Angular Gyrus brain
26 chr8:1956000-1958800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr8:1956000-1958800 Weak transcription Brain Substantia Nigra brain
28 chr8:1956000-1958800 Weak transcription HSMMtube muscle
29 chr8:1956000-1959400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr8:1956000-1959400 Weak transcription Thymus Thymus
31 chr8:1956200-1956800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr8:1956200-1957400 Enhancers Monocytes-CD14+_RO01746 blood
33 chr8:1956200-1958400 Weak transcription Brain Hippocampus Middle brain
34 chr8:1956200-1958600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr8:1956200-1958800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr8:1956200-1958800 Weak transcription Muscle Satellite Cultured Cells --
37 chr8:1956200-1958800 Weak transcription Brain Cingulate Gyrus brain
38 chr8:1956200-1958800 Weak transcription HSMM muscle
39 chr8:1956200-1959800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr8:1956200-1960200 Weak transcription Fetal Brain Female brain
41 chr8:1956400-1957200 Enhancers Fetal Muscle Trunk muscle
42 chr8:1956400-1959000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr8:1956400-1959600 Enhancers Primary B cells from cord blood blood

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Last update: Aug 31, 2015