Variant report

Variant rs111398868
Chromosome Location chr16:75540347-75540348
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75529400-75550000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr16:75529600-75541800 Weak transcription Right Atrium heart
3 chr16:75529800-75550200 Weak transcription Spleen Spleen
4 chr16:75532600-75549800 Weak transcription Brain Anterior Caudate brain
5 chr16:75532800-75550400 Weak transcription Brain Inferior Temporal Lobe brain
6 chr16:75533800-75550200 Weak transcription Small Intestine intestine
7 chr16:75534200-75550400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr16:75534400-75550600 Weak transcription Aorta Aorta
9 chr16:75534600-75547400 Weak transcription Fetal Intestine Small intestine
10 chr16:75535600-75550200 Weak transcription Brain Hippocampus Middle brain
11 chr16:75535800-75543400 Weak transcription HSMMtube muscle
12 chr16:75536000-75550200 Weak transcription Brain Cingulate Gyrus brain
13 chr16:75536200-75550000 Weak transcription Colon Smooth Muscle Colon
14 chr16:75536400-75549800 Weak transcription Stomach Smooth Muscle stomach
15 chr16:75536400-75550000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr16:75536400-75550000 Weak transcription Brain Substantia Nigra brain
17 chr16:75536800-75540400 Weak transcription Fetal Muscle Leg muscle
18 chr16:75538000-75550000 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr16:75538200-75541800 Weak transcription Fetal Muscle Trunk muscle
20 chr16:75538400-75546000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr16:75538400-75550200 Weak transcription Duodenum Mucosa Duodenum
22 chr16:75539200-75541200 Enhancers HepG2 liver
23 chr16:75539200-75543400 Enhancers Hela-S3 cervix
24 chr16:75539400-75541200 Enhancers Primary monocytes fromperipheralblood blood
25 chr16:75539600-75540800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr16:75539600-75541000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr16:75539800-75540400 Enhancers Osteobl bone
28 chr16:75539800-75541000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr16:75539800-75541000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr16:75539800-75541000 Enhancers HMEC breast
31 chr16:75539800-75541000 Enhancers NHEK skin
32 chr16:75540000-75540400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr16:75540000-75540400 Enhancers Primary neutrophils fromperipheralblood blood
34 chr16:75540000-75540400 Enhancers Colonic Mucosa Colon
35 chr16:75540000-75540600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr16:75540000-75540800 Enhancers HUVEC blood vessel
37 chr16:75540000-75541000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr16:75540000-75541000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr16:75540000-75541000 Enhancers Adipose Nuclei Adipose
40 chr16:75540200-75540400 Enhancers A549 lung
41 chr16:75540200-75540600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr16:75540200-75540600 Active TSS Skeletal Muscle Female skeletal muscle
43 chr16:75540200-75540800 Enhancers Skeletal Muscle Male skeletal muscle
44 chr16:75540200-75540800 Enhancers K562 blood
45 chr16:75540200-75540800 Enhancers NH-A brain
46 chr16:75540200-75541000 Flanking Active TSS Muscle Satellite Cultured Cells --
47 chr16:75540200-75541000 Enhancers HSMM muscle

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