Variant report

Variant	rs11142636
Chromosome Location	chr9:73500481-73500482
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10746857	0.83[ASN][1000 genomes]
rs10868925	0.85[ASN][1000 genomes]
rs1890016	0.82[ASN][1000 genomes]
rs7021176	0.81[ASN][1000 genomes]
rs7021289	0.80[ASN][1000 genomes]
rs7046928	0.86[ASN][1000 genomes]
rs7851915	0.83[ASN][1000 genomes]
rs7859581	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893441	chr9:73486034-73594114	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73497800-73500600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr9:73498000-73500600	Enhancers	NHDF-Ad	bronchial
3	chr9:73498400-73503600	Weak transcription	HUVEC	blood vessel
4	chr9:73498600-73500800	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr9:73499000-73500600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr9:73499600-73501200	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr9:73500400-73500600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr9:73500400-73500600	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr9:73500400-73500600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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