Variant report

Variant rs11145836
Chromosome Location chr9:139607421-139607422
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139606000-139607800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr9:139606000-139608200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr9:139606200-139607600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
4 chr9:139606200-139607600 Active TSS Brain Inferior Temporal Lobe brain
5 chr9:139606200-139607800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr9:139606200-139607800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:139606200-139608000 Active TSS ES-WA7 Cell Line embryonic stem cell
8 chr9:139606200-139608000 Active TSS H9 Cell Line embryonic stem cell
9 chr9:139606200-139608000 Bivalent/Poised TSS Brain Cingulate Gyrus brain
10 chr9:139606200-139608200 Active TSS iPS-15b Cell Line embryonic stem cell
11 chr9:139606200-139608200 Active TSS Pancreatic Islets Pancreatic Islet
12 chr9:139606200-139608200 Active TSS Right Atrium heart
13 chr9:139606400-139607600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr9:139606400-139607600 Active TSS Brain Germinal Matrix brain
15 chr9:139606400-139608200 Weak transcription Hela-S3 cervix
16 chr9:139606600-139607600 Active TSS H1 Cell Line embryonic stem cell
17 chr9:139606600-139607600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
18 chr9:139606600-139607600 Active TSS Primary hematopoietic stem cells blood
19 chr9:139606600-139607600 Weak transcription Fetal Heart heart
20 chr9:139606600-139607600 Active TSS Left Ventricle heart
21 chr9:139606600-139607600 Active TSS Rectal Smooth Muscle rectum
22 chr9:139606600-139607600 Active TSS A549 lung
23 chr9:139606600-139607600 Active TSS K562 blood
24 chr9:139606600-139607800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr9:139606600-139607800 Active TSS HUES6 Cell Line embryonic stem cell
26 chr9:139606600-139607800 Active TSS iPS-18 Cell Line embryonic stem cell
27 chr9:139606600-139607800 Active TSS iPS-20b Cell Line embryonic stem cell
28 chr9:139606600-139607800 Active TSS Brain Angular Gyrus brain
29 chr9:139606600-139607800 Bivalent/Poised TSS Psoas Muscle Psoas
30 chr9:139606600-139608000 Active TSS ES-I3 Cell Line embryonic stem cell
31 chr9:139606600-139608000 Active TSS Brain Anterior Caudate brain
32 chr9:139606600-139608200 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
33 chr9:139606600-139608400 Active TSS HUES64 Cell Line embryonic stem cell
34 chr9:139606600-139608600 Active TSS HUES48 Cell Line embryonic stem cell
35 chr9:139606600-139608600 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
36 chr9:139606600-139618000 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr9:139606800-139607600 Active TSS Primary hematopoietic stem cells short term culture blood
38 chr9:139606800-139607600 Enhancers Primary T helper 17 cells PMA-I stimulated --
39 chr9:139606800-139607600 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood
40 chr9:139606800-139607600 Active TSS Right Ventricle heart
41 chr9:139606800-139607600 Active TSS HUVEC blood vessel
42 chr9:139606800-139607800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr9:139606800-139607800 Active TSS Colon Smooth Muscle Colon
44 chr9:139606800-139608000 Enhancers Placenta Amnion Placenta Amnion
45 chr9:139607000-139607600 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
46 chr9:139607000-139607600 Active TSS HepG2 liver
47 chr9:139607000-139608000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
48 chr9:139607200-139607600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
49 chr9:139607200-139607600 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
50 chr9:139607200-139607600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin

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