Variant report

Variant	rs111612254
Chromosome Location	chr5:167070929-167070930
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932627	chr5:166744408-167290959	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1032559	chr5:167070888-167210684	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167065200-167071600	Enhancers	HSMM	muscle
2	chr5:167065600-167071600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr5:167065800-167071800	Enhancers	Osteobl	bone
4	chr5:167067000-167071200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr5:167067200-167084200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr5:167068200-167071600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr5:167069000-167072600	Enhancers	HMEC	breast
8	chr5:167069200-167072000	Enhancers	Hela-S3	cervix
9	chr5:167069200-167072000	Enhancers	NHDF-Ad	bronchial
10	chr5:167069200-167072200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr5:167069200-167072200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr5:167069200-167072600	Enhancers	NHEK	skin
13	chr5:167069400-167071600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr5:167069800-167071000	Enhancers	HUVEC	blood vessel
15	chr5:167069800-167071200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr5:167069800-167071400	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr5:167069800-167071800	Enhancers	NHLF	lung
18	chr5:167069800-167072200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr5:167069800-167072400	Enhancers	A549	lung
20	chr5:167070000-167071400	Enhancers	NH-A	brain
21	chr5:167070000-167071600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr5:167070000-167072200	Enhancers	Muscle Satellite Cultured Cells	--
23	chr5:167070600-167071000	Weak transcription	HSMMtube	muscle
24	chr5:167070800-167072000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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