Variant report

Variant rs11162079
Chromosome Location chr1:76540291-76540292
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76535000-76540400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:76539400-76540600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:76539800-76540400 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
4 chr1:76539800-76540400 Active TSS Fetal Muscle Trunk muscle
5 chr1:76539800-76540600 Active TSS Cortex derived primary cultured neurospheres brain
6 chr1:76539800-76540600 Active TSS Duodenum Mucosa Duodenum
7 chr1:76539800-76540600 Active TSS Fetal Thymus thymus
8 chr1:76539800-76540600 Active TSS GM12878-XiMat blood
9 chr1:76539800-76540600 Active TSS HMEC breast
10 chr1:76539800-76540800 Active TSS H1 Cell Line embryonic stem cell
11 chr1:76539800-76540800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:76539800-76540800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:76539800-76540800 Active TSS Fetal Heart heart
14 chr1:76539800-76540800 Active TSS Ovary ovary
15 chr1:76539800-76540800 Active TSS Rectal Mucosa Donor 29 rectum
16 chr1:76539800-76540800 Bivalent/Poised TSS Osteobl bone
17 chr1:76539800-76541000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:76539800-76541000 Active TSS Brain Angular Gyrus brain
19 chr1:76539800-76541000 Active TSS Brain Inferior Temporal Lobe brain
20 chr1:76539800-76541000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
21 chr1:76539800-76541000 Active TSS K562 blood
22 chr1:76539800-76541200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:76539800-76541200 Active TSS Brain Cingulate Gyrus brain
24 chr1:76539800-76541200 Active TSS Fetal Brain Male brain
25 chr1:76539800-76541200 Active TSS Fetal Intestine Large intestine
26 chr1:76539800-76541200 Active TSS NHEK skin
27 chr1:76539800-76541400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:76539800-76541400 Active TSS Fetal Brain Female brain
29 chr1:76539800-76541600 Flanking Active TSS Primary T cells from cord blood blood
30 chr1:76539800-76541600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr1:76539800-76542200 Flanking Active TSS Primary B cells from cord blood blood
32 chr1:76539800-76542200 Active TSS Duodenum Smooth Muscle Duodenum
33 chr1:76540000-76540400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:76540000-76540400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:76540000-76540400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:76540000-76540400 Active TSS Primary mononuclear cells fromperipheralblood Blood
37 chr1:76540000-76540400 Active TSS Adipose Nuclei Adipose
38 chr1:76540000-76540400 Enhancers Spleen Spleen
39 chr1:76540000-76540400 Active TSS HSMM muscle
40 chr1:76540000-76540600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:76540000-76540600 Active TSS Muscle Satellite Cultured Cells --
42 chr1:76540000-76540600 Active TSS Right Ventricle heart
43 chr1:76540000-76540800 Active TSS ES-WA7 Cell Line embryonic stem cell
44 chr1:76540000-76540800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr1:76540000-76540800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:76540000-76540800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
47 chr1:76540000-76540800 Active TSS Primary T killer memory cells from peripheral blood blood
48 chr1:76540000-76540800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
49 chr1:76540000-76540800 Active TSS Colonic Mucosa Colon
50 chr1:76540000-76540800 Active TSS Fetal Lung lung

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