The 2.0 version of rSNPBase

Variant report

Variant rs11162254
Chromosome Location chr1:77508917-77508918
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77497000-77516800 Weak transcription Fetal Stomach stomach
2 chr1:77503800-77512200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr1:77506000-77509800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:77506000-77558600 Weak transcription Stomach Smooth Muscle stomach
5 chr1:77506200-77510200 Weak transcription Rectal Smooth Muscle rectum
6 chr1:77506400-77509800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:77506400-77510000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:77506600-77509800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:77506600-77509800 Weak transcription Aorta Aorta
10 chr1:77506600-77510000 Weak transcription NHEK skin
11 chr1:77506800-77509600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:77506800-77509800 Weak transcription HMEC breast
13 chr1:77508600-77547600 Weak transcription Ovary ovary
14 chr1:77508800-77509400 Enhancers Pancreatic Islets Pancreatic Islet
15 chr1:77508800-77512000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015