Variant report

Variant rs11168249
Chromosome Location chr12:48208368-48208369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48203600-48208400 Flanking Active TSS Stomach Smooth Muscle stomach
2 chr12:48203800-48209000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
3 chr12:48203800-48209200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr12:48204000-48209400 Transcr. at gene 5' and 3' Fetal Thymus thymus
5 chr12:48204200-48208600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
6 chr12:48204200-48209600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
7 chr12:48205000-48208600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
8 chr12:48205200-48208600 Enhancers Placenta Amnion Placenta Amnion
9 chr12:48205400-48211800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr12:48205600-48208800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
11 chr12:48205800-48208400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
12 chr12:48205800-48209000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
13 chr12:48206400-48208800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
14 chr12:48206400-48209200 Enhancers Liver Liver
15 chr12:48206800-48208600 Enhancers Pancreas Pancrea
16 chr12:48206800-48209400 Enhancers Small Intestine intestine
17 chr12:48206800-48209400 Transcr. at gene 5' and 3' Thymus Thymus
18 chr12:48207000-48208400 Flanking Active TSS Primary hematopoietic stem cells blood
19 chr12:48207000-48208400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr12:48207000-48208400 Flanking Active TSS Adipose Nuclei Adipose
21 chr12:48207000-48208400 Flanking Active TSS Colonic Mucosa Colon
22 chr12:48207000-48209000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
23 chr12:48207000-48209200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:48207000-48209600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr12:48207200-48208400 Flanking Active TSS Duodenum Mucosa Duodenum
26 chr12:48207200-48208600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr12:48207200-48208600 Flanking Active TSS Primary T cells from cord blood blood
28 chr12:48207200-48208600 Weak transcription Fetal Kidney kidney
29 chr12:48207200-48208800 Genic enhancers Spleen Spleen
30 chr12:48207200-48209200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr12:48207200-48209200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
32 chr12:48207200-48209200 Enhancers Brain Cingulate Gyrus brain
33 chr12:48207400-48208400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr12:48207400-48208400 Enhancers Aorta Aorta
35 chr12:48207400-48208400 Enhancers NH-A brain
36 chr12:48207400-48208600 Enhancers H1 Cell Line embryonic stem cell
37 chr12:48207400-48208600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr12:48207400-48208600 Enhancers Placenta Placenta
39 chr12:48207400-48208600 Enhancers HSMMtube muscle
40 chr12:48207400-48208800 Enhancers HUES48 Cell Line embryonic stem cell
41 chr12:48207400-48208800 Enhancers Brain Angular Gyrus brain
42 chr12:48207400-48209000 Enhancers Fetal Intestine Large intestine
43 chr12:48207400-48209200 Enhancers Psoas Muscle Psoas
44 chr12:48207400-48210200 Genic enhancers Fetal Muscle Trunk muscle
45 chr12:48207400-48211400 Weak transcription Fetal Brain Male brain
46 chr12:48207600-48208400 Genic enhancers Muscle Satellite Cultured Cells --
47 chr12:48207600-48208400 Enhancers HMEC breast
48 chr12:48207600-48208400 Enhancers HSMM muscle
49 chr12:48207600-48208600 Enhancers Fetal Heart heart
50 chr12:48207600-48208600 Weak transcription Fetal Lung lung

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