Variant report

Variant	rs11168702
Chromosome Location	chr12:49117316-49117317
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10783278	0.81[JPT][hapmap]
rs10875849	0.81[JPT][hapmap]
rs10875861	0.81[JPT][hapmap]
rs11168687	0.82[JPT][hapmap]
rs11168698	0.81[JPT][hapmap]
rs2162317	0.81[JPT][hapmap]
rs2277365	0.81[JPT][hapmap]
rs3209584	0.81[JPT][hapmap]
rs3741628	0.81[JPT][hapmap]
rs3741630	0.81[JPT][hapmap]
rs3741632	0.81[JPT][hapmap]
rs3803025	0.81[JPT][hapmap]
rs3943899	0.80[JPT][hapmap]
rs4760740	0.81[JPT][hapmap]
rs6580689	0.81[JPT][hapmap]
rs7133756	0.81[JPT][hapmap]
rs7139236	0.81[JPT][hapmap]
rs7304711	0.81[JPT][hapmap]
rs7954548	0.81[JPT][hapmap]
rs7975030	0.81[JPT][hapmap]
rs9634241	0.81[JPT][hapmap]
rs9634262	0.81[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3332169	chr12:49005807-49150691	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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