Variant report

Variant rs11169031
Chromosome Location chr12:39056738-39056739
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:39045400-39068000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr12:39046000-39085400 Weak transcription Aorta Aorta
3 chr12:39046800-39080400 Weak transcription Spleen Spleen
4 chr12:39051600-39080400 Weak transcription Lung lung
5 chr12:39051600-39080800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr12:39054600-39071000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr12:39055400-39058000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
8 chr12:39055800-39057000 Weak transcription NHDF-Ad bronchial
9 chr12:39055800-39100800 Weak transcription NHEK skin
10 chr12:39056000-39056800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr12:39056000-39061200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr12:39056000-39080200 Weak transcription Ovary ovary
13 chr12:39056000-39092200 Weak transcription Colon Smooth Muscle Colon
14 chr12:39056000-39114800 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr12:39056000-39168600 Weak transcription Hela-S3 cervix
16 chr12:39056200-39056800 Weak transcription GM12878-XiMat blood
17 chr12:39056200-39057800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:39056200-39057800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr12:39056200-39060200 Weak transcription Liver Liver
20 chr12:39056200-39078400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr12:39056200-39078400 Weak transcription Adipose Nuclei Adipose
22 chr12:39056200-39079000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr12:39056200-39080200 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr12:39056400-39057400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr12:39056400-39058000 Enhancers Primary monocytes fromperipheralblood blood
26 chr12:39056400-39058600 Enhancers Primary hematopoietic stem cells blood
27 chr12:39056400-39058600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr12:39056600-39056800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr12:39056600-39057600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --

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