Variant report

Variant rs11169232
Chromosome Location chr12:50374317-50374318
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50362600-50385800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr12:50366400-50374600 Weak transcription Fetal Kidney kidney
3 chr12:50366600-50377400 Weak transcription NHEK skin
4 chr12:50367000-50378000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:50367400-50401200 Weak transcription Gastric stomach
6 chr12:50367600-50374800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr12:50368400-50374600 Weak transcription Pancreas Pancrea
8 chr12:50368400-50376000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr12:50369200-50374600 Weak transcription HSMMtube muscle
10 chr12:50369200-50376000 Weak transcription Fetal Lung lung
11 chr12:50369200-50377400 Weak transcription Right Ventricle heart
12 chr12:50369200-50377600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr12:50369200-50381600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr12:50369400-50377600 Weak transcription Fetal Thymus thymus
15 chr12:50369600-50377400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr12:50369600-50377400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr12:50369600-50379200 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr12:50369600-50418200 Weak transcription Colonic Mucosa Colon
19 chr12:50369800-50376000 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr12:50370000-50375200 Weak transcription Colon Smooth Muscle Colon
21 chr12:50370000-50377800 Weak transcription Thymus Thymus
22 chr12:50370200-50376000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr12:50371600-50375400 Enhancers Fetal Stomach stomach
24 chr12:50371800-50375000 Enhancers Fetal Brain Female brain
25 chr12:50371800-50376000 Weak transcription Fetal Intestine Large intestine
26 chr12:50372000-50374400 Enhancers HepG2 liver
27 chr12:50372000-50375000 Enhancers Brain Cingulate Gyrus brain
28 chr12:50372000-50375000 Enhancers Brain Substantia Nigra brain
29 chr12:50372000-50375200 Enhancers Brain Angular Gyrus brain
30 chr12:50372000-50375200 Enhancers Brain Inferior Temporal Lobe brain
31 chr12:50372000-50375600 Enhancers Cortex derived primary cultured neurospheres brain
32 chr12:50372200-50375200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr12:50372200-50378200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr12:50372400-50404800 Weak transcription Spleen Spleen
35 chr12:50372800-50374400 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr12:50372800-50375800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr12:50373000-50376000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr12:50373000-50377600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr12:50373000-50377800 Enhancers Primary monocytes fromperipheralblood blood
40 chr12:50373200-50377400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr12:50373400-50374400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr12:50373400-50374400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:50373400-50374400 Enhancers Brain Germinal Matrix brain
44 chr12:50373400-50374400 Weak transcription Fetal Intestine Small intestine
45 chr12:50373400-50374600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr12:50373400-50374600 Weak transcription Fetal Brain Male brain
47 chr12:50373400-50377400 Weak transcription Fetal Muscle Trunk muscle
48 chr12:50373400-50377600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr12:50373400-50377600 Enhancers Brain Anterior Caudate brain
50 chr12:50373400-50377800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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