The 2.0 version of rSNPBase

Variant report

Variant rs11169748
Chromosome Location chr12:51579171-51579172
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51567400-51583400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr12:51567400-51584000 Weak transcription Placenta Amnion Placenta Amnion
3 chr12:51567400-51610600 Weak transcription Right Atrium heart
4 chr12:51574800-51583400 Weak transcription Aorta Aorta
5 chr12:51575600-51583600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr12:51575800-51583600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr12:51576800-51580800 Enhancers Fetal Muscle Leg muscle
8 chr12:51577600-51582400 Weak transcription Brain Substantia Nigra brain
9 chr12:51577600-51583000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr12:51577800-51579600 Weak transcription Fetal Thymus thymus
11 chr12:51577800-51580200 Enhancers HepG2 liver
12 chr12:51577800-51580600 Weak transcription Fetal Stomach stomach
13 chr12:51577800-51582000 Weak transcription Brain Anterior Caudate brain
14 chr12:51577800-51583400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr12:51578000-51580000 Weak transcription GM12878-XiMat blood
16 chr12:51578000-51580600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr12:51578000-51582200 Weak transcription Brain Hippocampus Middle brain
18 chr12:51578000-51583000 Weak transcription Brain Cingulate Gyrus brain
19 chr12:51578000-51583400 Weak transcription Left Ventricle heart
20 chr12:51578000-51583400 Weak transcription Ovary ovary
21 chr12:51578000-51583600 Weak transcription Pancreas Pancrea
22 chr12:51578000-51587600 Weak transcription Muscle Satellite Cultured Cells --
23 chr12:51578200-51579400 Enhancers Fetal Muscle Trunk muscle
24 chr12:51578200-51580200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr12:51578200-51580200 Enhancers HSMMtube muscle
26 chr12:51578200-51580200 Weak transcription K562 blood
27 chr12:51578200-51580800 Weak transcription Brain Angular Gyrus brain
28 chr12:51578200-51581000 Weak transcription Fetal Kidney kidney
29 chr12:51578200-51582200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr12:51578200-51582200 Weak transcription Brain Germinal Matrix brain
31 chr12:51578200-51586000 Weak transcription Fetal Heart heart
32 chr12:51578200-51596800 Weak transcription Fetal Lung lung
33 chr12:51578400-51580000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr12:51578400-51580400 Weak transcription Psoas Muscle Psoas
35 chr12:51578400-51580800 Weak transcription HSMM muscle
36 chr12:51578400-51583800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr12:51578600-51580200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr12:51578800-51580200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr12:51579000-51583000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015