Variant report

Variant	rs11176728
Chromosome Location	chr12:67807177-67807178
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17249264	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv559212	chr12:67373549-67850925	Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv1054111	chr12:67556780-67865542	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:67804600-67807600	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr12:67804800-67807600	Weak transcription	Right Atrium	heart
3	chr12:67805000-67807200	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr12:67805000-67807800	Weak transcription	Small Intestine	intestine
5	chr12:67805200-67807400	Weak transcription	HSMMtube	muscle
6	chr12:67805400-67814000	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr12:67805600-67807400	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr12:67805600-67807800	Weak transcription	Duodenum Mucosa	Duodenum
9	chr12:67805600-67813600	Weak transcription	Pancreas	Pancrea
10	chr12:67806000-67807200	Weak transcription	Fetal Intestine Large	intestine
11	chr12:67806600-67807400	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr12:67806800-67807200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr12:67806800-67807200	Weak transcription	Fetal Intestine Small	intestine
14	chr12:67806800-67808400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr12:67806800-67808400	Enhancers	NHEK	skin
16	chr12:67806800-67808600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr12:67806800-67809200	Enhancers	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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