Variant report

Variant	rs1118036
Chromosome Location	chr14:85173181-85173182
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1383774	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1481414	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2623112	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2623113	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2623115	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2623139	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2623140	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2765910	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2765911	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2819794	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2819796	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35191821	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4904194	0.99[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1046875	chr14:84993510-85193250	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv1829021	chr14:85106009-85196163	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv902163	chr14:85165200-85390134	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85173000-85173800	Enhancers	HUVEC	blood vessel
2	chr14:85173000-85174200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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