Variant report

Variant	rs111804711
Chromosome Location	chr4:15809164-15809165
allele	-/TGAG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012988	chr4:15597510-16091527	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv10460	chr4:15757611-15818206	ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1013204	chr4:15762970-15836237	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
4	nsv1010597	chr4:15776181-15836237	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
5	nsv916742	chr4:15797994-16064232	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	esv3417480	chr4:15808754-15809221	Weak transcription Enhancers Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:15794000-15812200	Genic enhancers	Dnd41	blood
2	chr4:15805800-15809600	Weak transcription	Primary hematopoietic stem cells	blood
3	chr4:15807800-15810200	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr4:15807800-15810400	Weak transcription	Duodenum Mucosa	Duodenum
5	chr4:15807800-15810600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr4:15808000-15809400	Genic enhancers	Primary T cells from cord blood	blood
7	chr4:15808000-15809600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr4:15808000-15809600	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr4:15808000-15809800	Weak transcription	Psoas Muscle	Psoas
10	chr4:15808000-15810000	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr4:15808000-15810600	Weak transcription	Adipose Nuclei	Adipose
12	chr4:15808000-15813200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr4:15808200-15809200	Genic enhancers	Thymus	Thymus
14	chr4:15808200-15809400	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr4:15808200-15809400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr4:15808200-15809400	Genic enhancers	Fetal Thymus	thymus
17	chr4:15808200-15809600	Weak transcription	GM12878-XiMat	blood
18	chr4:15808200-15809800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr4:15808200-15811400	Enhancers	Spleen	Spleen
20	chr4:15808400-15809400	Weak transcription	Primary B cells from cord blood	blood
21	chr4:15808400-15809800	Weak transcription	Primary B cells from peripheral blood	blood
22	chr4:15808400-15809800	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr4:15808400-15810400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr4:15808400-15819400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr4:15808600-15810800	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr4:15808800-15810400	Weak transcription	Primary T helper cells fromperipheralblood	blood
27	chr4:15809000-15809200	Enhancers	Left Ventricle	heart
28	chr4:15809000-15809200	Enhancers	Right Atrium	heart

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