Variant report

Variant rs11180541
Chromosome Location chr12:75874076-75874077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:75865400-75874800 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr12:75868400-75874400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr12:75868400-75875600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr12:75868600-75874600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr12:75871600-75874400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
6 chr12:75872000-75874200 Enhancers Fetal Thymus thymus
7 chr12:75872000-75874200 Enhancers Thymus Thymus
8 chr12:75873200-75874200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
9 chr12:75873200-75874400 Weak transcription Placenta Placenta
10 chr12:75873200-75874600 Flanking Active TSS Primary B cells from cord blood blood
11 chr12:75873400-75874200 Flanking Active TSS Muscle Satellite Cultured Cells --
12 chr12:75873400-75874200 Enhancers Primary mononuclear cells fromperipheralblood Blood
13 chr12:75873400-75878800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr12:75873600-75874200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr12:75873600-75874200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr12:75873600-75874200 Flanking Active TSS Brain Hippocampus Middle brain
17 chr12:75873600-75874400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
18 chr12:75873600-75874400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
19 chr12:75873600-75874400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
20 chr12:75873600-75874400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
21 chr12:75873600-75874600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr12:75873600-75874800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
23 chr12:75873600-75875000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
24 chr12:75873600-75875000 Active TSS Skeletal Muscle Male skeletal muscle
25 chr12:75873600-75875000 Active TSS A549 lung
26 chr12:75873600-75875400 Active TSS Stomach Smooth Muscle stomach
27 chr12:75873600-75875600 Active TSS Brain Inferior Temporal Lobe brain
28 chr12:75873600-75877000 Active TSS Duodenum Smooth Muscle Duodenum
29 chr12:75873600-75878200 Active TSS Aorta Aorta
30 chr12:75873600-75878200 Flanking Active TSS Dnd41 blood
31 chr12:75873800-75874200 Enhancers Primary neutrophils fromperipheralblood blood
32 chr12:75873800-75874200 Flanking Active TSS Primary B cells from peripheral blood blood
33 chr12:75873800-75874200 Flanking Active TSS Brain Substantia Nigra brain
34 chr12:75873800-75874400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr12:75873800-75874400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
36 chr12:75873800-75874600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:75873800-75874600 Enhancers HUES6 Cell Line embryonic stem cell
38 chr12:75873800-75874800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
39 chr12:75873800-75875200 Active TSS Pancreatic Islets Pancreatic Islet
40 chr12:75873800-75875200 Active TSS HSMMtube muscle
41 chr12:75873800-75875400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
42 chr12:75873800-75875400 Active TSS Duodenum Mucosa Duodenum
43 chr12:75873800-75875600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr12:75873800-75875600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr12:75873800-75875600 Active TSS Brain Cingulate Gyrus brain
46 chr12:75873800-75875600 Weak transcription Lung lung
47 chr12:75873800-75875600 Active TSS Ovary ovary
48 chr12:75873800-75875800 Active TSS Brain Angular Gyrus brain
49 chr12:75873800-75876000 Active TSS Osteobl bone
50 chr12:75873800-75876200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung

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