The 2.0 version of rSNPBase

Variant report

Variant rs11186594
Chromosome Location chr10:93262981-93262982
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93214200-93272000 Weak transcription HUVEC blood vessel
2 chr10:93220600-93271400 Weak transcription HMEC breast
3 chr10:93224200-93271200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr10:93224200-93280000 Weak transcription Colon Smooth Muscle Colon
5 chr10:93227800-93277400 Weak transcription Brain Hippocampus Middle brain
6 chr10:93227800-93280000 Weak transcription Left Ventricle heart
7 chr10:93228000-93263200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr10:93228000-93271200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr10:93228000-93271400 Weak transcription Fetal Muscle Trunk muscle
10 chr10:93228000-93279400 Weak transcription Ovary ovary
11 chr10:93231000-93263000 Weak transcription Fetal Stomach stomach
12 chr10:93236200-93271600 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr10:93236400-93279800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr10:93236600-93264400 Weak transcription Placenta Placenta
15 chr10:93236600-93275600 Weak transcription Aorta Aorta
16 chr10:93238000-93272200 Weak transcription Brain Anterior Caudate brain
17 chr10:93244000-93264600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr10:93244600-93284000 Weak transcription Esophagus oesophagus
19 chr10:93244800-93273800 Weak transcription Brain Germinal Matrix brain
20 chr10:93248000-93279600 Weak transcription Fetal Intestine Large intestine
21 chr10:93248200-93279800 Weak transcription Psoas Muscle Psoas
22 chr10:93254600-93264200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr10:93255200-93271200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr10:93255600-93271200 Weak transcription Osteobl bone
25 chr10:93256200-93265600 Weak transcription Brain Cingulate Gyrus brain
26 chr10:93256200-93271200 Weak transcription NHDF-Ad bronchial
27 chr10:93256200-93271200 Weak transcription NHLF lung
28 chr10:93256400-93271400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr10:93256800-93267600 Weak transcription Placenta Amnion Placenta Amnion
30 chr10:93257000-93263400 Weak transcription Lung lung
31 chr10:93257400-93263600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr10:93257400-93274000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr10:93257600-93263000 Strong transcription HSMM muscle
34 chr10:93257600-93263200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr10:93257800-93263200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr10:93257800-93264600 Weak transcription Brain Angular Gyrus brain
37 chr10:93258000-93263800 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr10:93258200-93263000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr10:93258200-93271000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr10:93258200-93273400 Weak transcription Stomach Smooth Muscle stomach
41 chr10:93259000-93263000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr10:93259000-93284400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr10:93259200-93263800 Strong transcription Fetal Lung lung
44 chr10:93259400-93277400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr10:93259600-93271200 Weak transcription NH-A brain
46 chr10:93259600-93277400 Weak transcription Fetal Muscle Leg muscle
47 chr10:93260000-93271200 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr10:93260000-93273800 Weak transcription Rectal Smooth Muscle rectum
49 chr10:93260000-93274600 Weak transcription Fetal Brain Female brain
50 chr10:93260400-93263000 Strong transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015