Variant report

Variant rs112053584
Chromosome Location chr21:47600544-47600545
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47573600-47602000 Weak transcription Gastric stomach
2 chr21:47573800-47602200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr21:47573800-47603800 Weak transcription Right Atrium heart
4 chr21:47581400-47602800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr21:47582000-47602200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr21:47582000-47602800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr21:47582000-47602800 Weak transcription Ovary ovary
8 chr21:47582400-47603800 Weak transcription Thymus Thymus
9 chr21:47583000-47602800 Weak transcription H9 Cell Line embryonic stem cell
10 chr21:47588600-47602800 Weak transcription Lung lung
11 chr21:47594200-47603800 Weak transcription Fetal Intestine Small intestine
12 chr21:47596800-47600600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr21:47596800-47603000 Weak transcription Brain Hippocampus Middle brain
14 chr21:47597200-47602800 Weak transcription Right Ventricle heart
15 chr21:47597200-47603800 Weak transcription Fetal Brain Female brain
16 chr21:47598000-47602800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr21:47598000-47603000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr21:47598000-47603400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr21:47598600-47603800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr21:47599200-47602800 Weak transcription Pancreas Pancrea
21 chr21:47599400-47600600 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr21:47599400-47600800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
23 chr21:47599600-47600600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr21:47599600-47601400 Strong transcription Fetal Muscle Leg muscle
25 chr21:47599600-47601600 Strong transcription Fetal Muscle Trunk muscle
26 chr21:47599600-47602800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr21:47599600-47603000 Strong transcription Fetal Stomach stomach
28 chr21:47599800-47600800 Transcr. at gene 5' and 3' K562 blood
29 chr21:47599800-47601400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr21:47599800-47601600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr21:47600000-47600600 Genic enhancers HUES64 Cell Line embryonic stem cell
32 chr21:47600000-47600800 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr21:47600000-47601000 Enhancers Primary hematopoietic stem cells blood
34 chr21:47600000-47601000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr21:47600000-47601000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr21:47600000-47601200 Enhancers ES-WA7 Cell Line embryonic stem cell
37 chr21:47600000-47601600 Bivalent Enhancer Placenta Placenta
38 chr21:47600200-47600600 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr21:47600200-47600800 Enhancers HUES48 Cell Line embryonic stem cell
40 chr21:47600200-47601200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
41 chr21:47600200-47601600 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr21:47600200-47603600 Enhancers H1 Cell Line embryonic stem cell
43 chr21:47600400-47600800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr21:47600400-47601000 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr21:47600400-47601400 Enhancers HUES6 Cell Line embryonic stem cell

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