The 2.0 version of rSNPBase

Variant report

Variant rs11207244
Chromosome Location chr1:58963858-58963859
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:58918400-58974000 Weak transcription Spleen Spleen
2 chr1:58931000-58977000 Weak transcription Rectal Smooth Muscle rectum
3 chr1:58931200-58969400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:58931200-59010800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:58931600-58974000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:58932600-58974200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:58932600-58977000 Weak transcription HSMMtube muscle
8 chr1:58932800-58968000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:58933800-58984800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:58934600-58968000 Weak transcription Brain Hippocampus Middle brain
11 chr1:58934600-58974000 Weak transcription Right Ventricle heart
12 chr1:58934800-58967200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:58934800-58969200 Weak transcription Liver Liver
14 chr1:58934800-58976600 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:58934800-58994000 Weak transcription HSMM muscle
16 chr1:58935000-58974000 Weak transcription Brain Cingulate Gyrus brain
17 chr1:58942000-58969200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:58942000-58974200 Weak transcription Brain Substantia Nigra brain
19 chr1:58942200-58974200 Weak transcription Fetal Thymus thymus
20 chr1:58944400-58967800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:58944600-58976000 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:58945800-58974200 Weak transcription Colon Smooth Muscle Colon
23 chr1:58946200-58967000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:58946200-58974000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:58946200-58977000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:58946200-58979600 Weak transcription GM12878-XiMat blood
27 chr1:58946400-58973800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:58946400-58993800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:58946600-58977000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:58947600-58977000 Weak transcription Brain Angular Gyrus brain
31 chr1:58948400-58977000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:58949200-58967000 Weak transcription Left Ventricle heart
33 chr1:58949600-58969400 Weak transcription Dnd41 blood
34 chr1:58949800-58969200 Weak transcription Stomach Smooth Muscle stomach
35 chr1:58950200-58976600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:58952800-58977200 Weak transcription Small Intestine intestine
37 chr1:58953000-58966200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr1:58953000-58974000 Weak transcription Fetal Lung lung
39 chr1:58953200-58986000 Weak transcription Colonic Mucosa Colon
40 chr1:58953600-58999200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:58954800-58964600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:58955000-58965600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:58955000-58966800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr1:58955000-58967000 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:58955000-58967000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:58955000-58967000 Weak transcription Ovary ovary
47 chr1:58955000-58967000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr1:58955000-58967200 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr1:58955000-58967200 Weak transcription Fetal Intestine Large intestine
50 chr1:58955000-58967600 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015