Variant report

Variant	rs1122177
Chromosome Location	chr12:29162180-29162181
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:25 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532233	chr12:29009388-29496179	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv995123	chr12:29095272-29571558	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
3	esv2758301	chr12:29110782-29289849	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv2759888	chr12:29110782-29289849	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv557888	chr12:29158183-29163291	Enhancers	n/a	n/a	inside rSNPs	diseases
6	nsv557889	chr12:29158183-29164515	Enhancers	n/a	n/a	inside rSNPs	diseases
7	nsv557890	chr12:29158183-29167983	Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3509368	chr12:29160485-29165983	Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv999221	chr12:29160579-29164985	Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3484785	chr12:29161330-29165138	Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv21179	chr12:29161450-29164823	Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3484763	chr12:29161535-29164944	Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3509367	chr12:29161584-29164965	Enhancers	n/a	n/a	inside rSNPs	diseases
14	esv3509369	chr12:29161585-29164944	Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3509370	chr12:29161585-29164965	Enhancers	n/a	n/a	inside rSNPs	diseases
16	esv3484796	chr12:29161588-29164914	Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3484774	chr12:29161599-29164905	Enhancers	n/a	n/a	inside rSNPs	diseases
18	esv3484807	chr12:29161607-29164871	Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv996399	chr12:29161652-29164990	Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv3484818	chr12:29161677-29164838	Enhancers	n/a	n/a	inside rSNPs	diseases
21	nsv557891	chr12:29162180-29163077	Enhancers	n/a	n/a	inside rSNPs	diseases
22	nsv557892	chr12:29162180-29163291	Enhancers	n/a	n/a	inside rSNPs	diseases
23	nsv557893	chr12:29162180-29163796	Enhancers	n/a	n/a	inside rSNPs	diseases
24	nsv557894	chr12:29162180-29164361	Enhancers	n/a	n/a	inside rSNPs	diseases
25	nsv557895	chr12:29162180-29164515	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:29161400-29162400	Enhancers	HMEC	breast
2	chr12:29161400-29162400	Enhancers	NHEK	skin
3	chr12:29161600-29162400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr12:29161600-29162400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr12:29161800-29162400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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