Variant report

Variant rs112289496
Chromosome Location chr16:30199532-30199533
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:30195000-30205800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr16:30195600-30199600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
3 chr16:30195800-30199800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr16:30196000-30199800 Transcr. at gene 5' and 3' GM12878-XiMat blood
5 chr16:30196000-30200600 Weak transcription Placenta Amnion Placenta Amnion
6 chr16:30196000-30205800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr16:30196200-30199600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr16:30196200-30199600 Weak transcription Fetal Lung lung
9 chr16:30196200-30201000 Weak transcription NHEK skin
10 chr16:30196400-30205800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr16:30196400-30205800 Weak transcription Brain Substantia Nigra brain
12 chr16:30196400-30205800 Weak transcription Right Atrium heart
13 chr16:30197200-30205800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr16:30197200-30205800 Weak transcription Brain Anterior Caudate brain
15 chr16:30197400-30199800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
16 chr16:30197400-30201400 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr16:30197600-30199600 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
18 chr16:30197600-30199600 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
19 chr16:30197600-30199800 Genic enhancers Spleen Spleen
20 chr16:30197800-30199600 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
21 chr16:30197800-30199800 Strong transcription Fetal Stomach stomach
22 chr16:30198000-30199800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
23 chr16:30198000-30199800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr16:30198200-30199600 Strong transcription NHLF lung
25 chr16:30198200-30199800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr16:30198200-30199800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr16:30198200-30199800 Genic enhancers Gastric stomach
28 chr16:30198200-30200000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr16:30198400-30199800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr16:30198400-30199800 Strong transcription Muscle Satellite Cultured Cells --
31 chr16:30198400-30199800 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr16:30198600-30199600 Genic enhancers Primary hematopoietic stem cells blood
33 chr16:30198600-30199600 Genic enhancers Brain Inferior Temporal Lobe brain
34 chr16:30198600-30199800 Genic enhancers Brain Cingulate Gyrus brain
35 chr16:30198600-30199800 Genic enhancers Lung lung
36 chr16:30198600-30199800 Enhancers Pancreas Pancrea
37 chr16:30198600-30200000 Genic enhancers Dnd41 blood
38 chr16:30198800-30199600 Genic enhancers Esophagus oesophagus
39 chr16:30198800-30199800 Genic enhancers Primary B cells from cord blood blood
40 chr16:30198800-30199800 Genic enhancers Primary B cells from peripheral blood blood
41 chr16:30198800-30199800 Genic enhancers Primary hematopoietic stem cells short term culture blood
42 chr16:30198800-30199800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr16:30198800-30199800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr16:30198800-30199800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
45 chr16:30198800-30199800 Strong transcription Brain Germinal Matrix brain
46 chr16:30198800-30199800 Strong transcription Fetal Brain Female brain
47 chr16:30198800-30199800 Genic enhancers Thymus Thymus
48 chr16:30198800-30200000 Genic enhancers Primary monocytes fromperipheralblood blood
49 chr16:30198800-30201600 Weak transcription Rectal Smooth Muscle rectum
50 chr16:30199000-30199600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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