Variant report

Variant	rs112317408
Chromosome Location	chr7:66277045-66277046
allele	-/AA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
2	nsv888328	chr7:66173040-66327654	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv888329	chr7:66234585-66376095	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv981513	chr7:66276464-66291614	Weak transcription Enhancers Strong transcription Genic enhancers	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66232600-66279800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr7:66236800-66278400	Strong transcription	Primary T helper cells fromperipheralblood	blood
3	chr7:66237200-66277600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr7:66245600-66279200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr7:66245600-66279400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:66246200-66277800	Strong transcription	Primary neutrophils fromperipheralblood	blood
7	chr7:66246200-66279800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr7:66248400-66277800	Strong transcription	Osteobl	bone
9	chr7:66248800-66277600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr7:66249400-66278600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr7:66250000-66279200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
12	chr7:66250000-66279200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr7:66250200-66277800	Strong transcription	Primary T cells from cord blood	blood
14	chr7:66250200-66278600	Strong transcription	Fetal Muscle Trunk	muscle
15	chr7:66253200-66277600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr7:66254000-66277400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr7:66254000-66278400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr7:66254200-66277200	Strong transcription	Duodenum Mucosa	Duodenum
19	chr7:66254200-66278600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr7:66254600-66278600	Strong transcription	HSMM	muscle
21	chr7:66254800-66277800	Strong transcription	Rectal Mucosa Donor 29	rectum
22	chr7:66255600-66277200	Weak transcription	Fetal Heart	heart
23	chr7:66255600-66279800	Weak transcription	Right Atrium	heart
24	chr7:66256200-66278600	Strong transcription	Adipose Nuclei	Adipose
25	chr7:66256600-66278400	Strong transcription	Fetal Muscle Leg	muscle
26	chr7:66256600-66278600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr7:66256600-66279000	Strong transcription	Fetal Stomach	stomach
28	chr7:66257200-66277800	Strong transcription	Ovary	ovary
29	chr7:66257200-66278400	Strong transcription	Thymus	Thymus
30	chr7:66257600-66278600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
31	chr7:66258600-66277200	Strong transcription	Primary T helper cells PMA-I stimulated	--
32	chr7:66259600-66277600	Strong transcription	Placenta	Placenta
33	chr7:66259800-66277200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
34	chr7:66259800-66277800	Strong transcription	Cortex derived primary cultured neurospheres	brain
35	chr7:66259800-66278600	Strong transcription	HSMMtube	muscle
36	chr7:66259800-66278800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr7:66260000-66277200	Strong transcription	Left Ventricle	heart
38	chr7:66260000-66277200	Strong transcription	Sigmoid Colon	Sigmoid Colon
39	chr7:66260000-66277200	Strong transcription	NHEK	skin
40	chr7:66260000-66277400	Strong transcription	Duodenum Smooth Muscle	Duodenum
41	chr7:66260000-66278600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr7:66260000-66278800	Strong transcription	Fetal Intestine Small	intestine
43	chr7:66261000-66281400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr7:66262800-66278000	Weak transcription	Stomach Mucosa	stomach
45	chr7:66266600-66277200	Strong transcription	Primary B cells from cord blood	blood
46	chr7:66267600-66277400	Weak transcription	Small Intestine	intestine
47	chr7:66268200-66278400	Strong transcription	NHDF-Ad	bronchial
48	chr7:66269000-66277600	Strong transcription	Muscle Satellite Cultured Cells	--
49	chr7:66269200-66278400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
50	chr7:66269600-66277600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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