Variant report

Variant	rs112333390
Chromosome Location	chr6:37533429-37533430
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37533306..37535085-chr6:37536114..37538057,2	K562	blood:
2	chr6:37526579..37529682-chr6:37532707..37536538,3	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752124	chr6:37416219-37680622	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv1028825	chr6:37495154-38278320	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv522098	chr6:37532103-37545923	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv522466	chr6:37532103-37545923	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37510800-37533800	Enhancers	Primary B cells from peripheral blood	blood
2	chr6:37521200-37533800	Enhancers	Primary B cells from cord blood	blood
3	chr6:37522200-37533600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr6:37528400-37533600	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr6:37528400-37533800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
6	chr6:37528600-37533800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr6:37528600-37533800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr6:37528800-37535600	Enhancers	Fetal Brain Male	brain
9	chr6:37529200-37533600	Weak transcription	Spleen	Spleen
10	chr6:37532400-37533800	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
11	chr6:37532600-37533600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr6:37532600-37533600	Enhancers	Right Atrium	heart
13	chr6:37532600-37534200	Flanking Active TSS	GM12878-XiMat	blood
14	chr6:37532800-37533600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr6:37532800-37533600	Bivalent Enhancer	Fetal Muscle Leg	muscle
16	chr6:37532800-37533600	Enhancers	Right Ventricle	heart
17	chr6:37532800-37533800	Enhancers	Left Ventricle	heart
18	chr6:37532800-37534400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr6:37533000-37533600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr6:37533000-37533600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
21	chr6:37533000-37533600	Bivalent Enhancer	Fetal Stomach	stomach
22	chr6:37533000-37533600	Bivalent Enhancer	Osteobl	bone
23	chr6:37533000-37533800	Bivalent Enhancer	Fetal Kidney	kidney
24	chr6:37533000-37533800	Bivalent Enhancer	HSMMtube	muscle
25	chr6:37533000-37534000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr6:37533000-37534200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
27	chr6:37533000-37534200	Enhancers	Primary hematopoietic stem cells	blood
28	chr6:37533000-37534200	Bivalent Enhancer	Fetal Lung	lung
29	chr6:37533000-37534400	Flanking Active TSS	Brain Germinal Matrix	brain
30	chr6:37533200-37533600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr6:37533200-37533600	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
32	chr6:37533200-37533600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
33	chr6:37533200-37533600	Enhancers	Thymus	Thymus
34	chr6:37533200-37533800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
35	chr6:37533200-37533800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr6:37533200-37533800	Enhancers	Fetal Heart	heart
37	chr6:37533200-37534000	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
38	chr6:37533200-37534000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
39	chr6:37533200-37534000	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
40	chr6:37533200-37534200	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr6:37533200-37534200	Flanking Active TSS	Fetal Thymus	thymus
42	chr6:37533200-37534400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr6:37533200-37534400	Enhancers	Lung	lung
44	chr6:37533400-37533600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr6:37533400-37533600	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
46	chr6:37533400-37533600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr6:37533400-37533600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr6:37533400-37533600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
49	chr6:37533400-37533600	Bivalent Enhancer	Adipose Nuclei	Adipose
50	chr6:37533400-37533600	Flanking Active TSS	Aorta	Aorta

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