Variant report

Variant	rs11233742
Chromosome Location	chr11:83470481-83470482
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11233737	0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12287368	1.00[AFR][1000 genomes]
rs12287539	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12287586	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13377524	0.93[YRI][hapmap];0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs57078494	0.85[AMR][1000 genomes]
rs59316588	0.85[AMR][1000 genomes]
rs7927605	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7945421	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83460800-83471800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr11:83461200-83472000	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr11:83470000-83471200	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr11:83470200-83470800	Enhancers	H9 Cell Line	embryonic stem cell
5	chr11:83470200-83470800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr11:83470400-83470600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
7	chr11:83470400-83470800	Enhancers	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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