Variant report

Variant	rs112337970
Chromosome Location	chr18:28355808-28355809
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428675	chr18:28278505-28444515	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv909514	chr18:28321803-28420334	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv961125	chr18:28354817-28370499	ZNF genes & repeats Active TSS Enhancers Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:28353800-28360800	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr18:28354600-28356000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr18:28355000-28356600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr18:28355200-28356200	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr18:28355200-28357400	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr18:28355600-28357200	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr18:28355800-28356200	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr18:28355800-28356200	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr18:28355800-28357200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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