Variant report

Variant	rs112349934
Chromosome Location	chr10:118854967-118854968
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832002	chr10:118797070-119005840	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
2	nsv975788	chr10:118854474-118856796	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118851200-118855200	Enhancers	Brain Germinal Matrix	brain
2	chr10:118853400-118855400	Enhancers	Brain Anterior Caudate	brain
3	chr10:118853600-118855000	Enhancers	Brain Inferior Temporal Lobe	brain
4	chr10:118853800-118856400	Enhancers	Brain Cingulate Gyrus	brain
5	chr10:118853800-118857200	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:118854000-118855000	Enhancers	Fetal Brain Male	brain
7	chr10:118854000-118857200	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr10:118854000-118857400	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr10:118854200-118855000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr10:118854400-118855000	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr10:118854400-118855000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
12	chr10:118854400-118855000	Enhancers	H1 Cell Line	embryonic stem cell
13	chr10:118854400-118855000	Enhancers	H9 Cell Line	embryonic stem cell
14	chr10:118854400-118855200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr10:118854400-118855200	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr10:118854400-118856600	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr10:118854400-118856600	Enhancers	Brain Hippocampus Middle	brain
18	chr10:118854600-118855000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
19	chr10:118854600-118856400	Enhancers	Brain Angular Gyrus	brain
20	chr10:118854600-118856400	Enhancers	Brain Substantia Nigra	brain
21	chr10:118854800-118855800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr10:118854800-118856200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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