Variant report

Variant	rs11236215
Chromosome Location	chr11:74396330-74396331
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74396286..74400034-chr11:74405980..74408368,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-POLD3-7	chr11:74396269-74396550	NONHSAT022910

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2000926	0.93[ASN][1000 genomes]
rs4944058	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757451	chr11:73842609-74545888	Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	esv2759837	chr11:73842609-74557597	Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
3	esv34979	chr11:73878688-74533452	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
4	esv2758277	chr11:73887567-74557597	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
5	nsv825994	chr11:73936667-74534455	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
6	nsv932190	chr11:74359867-74618935	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74390400-74397800	Weak transcription	K562	blood
2	chr11:74395000-74398000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:74395000-74399600	Weak transcription	Psoas Muscle	Psoas
4	chr11:74395000-74407000	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr11:74395200-74398400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr11:74395200-74399000	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr11:74395200-74404600	Weak transcription	Pancreas	Pancrea
8	chr11:74395200-74406800	Weak transcription	Right Ventricle	heart
9	chr11:74395400-74397600	Weak transcription	HMEC	breast
10	chr11:74395400-74398400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr11:74395400-74398800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr11:74395400-74399000	Weak transcription	Right Atrium	heart
13	chr11:74395600-74396400	Weak transcription	Brain Hippocampus Middle	brain
14	chr11:74395600-74397600	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr11:74395600-74397600	Weak transcription	NH-A	brain
16	chr11:74395600-74397600	Weak transcription	NHDF-Ad	bronchial
17	chr11:74395600-74397800	Weak transcription	Adipose Nuclei	Adipose
18	chr11:74395600-74398000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr11:74395600-74398600	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr11:74395600-74406800	Weak transcription	Lung	lung
21	chr11:74395600-74406800	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr11:74395800-74397400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr11:74395800-74397400	Weak transcription	Osteobl	bone
24	chr11:74395800-74397600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr11:74395800-74397800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr11:74395800-74397800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr11:74395800-74397800	Weak transcription	HSMM	muscle
28	chr11:74395800-74397800	Weak transcription	NHLF	lung
29	chr11:74395800-74398600	Weak transcription	A549	lung
30	chr11:74395800-74399000	Weak transcription	Spleen	Spleen
31	chr11:74396000-74397600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr11:74396000-74405000	Weak transcription	Colon Smooth Muscle	Colon

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