Variant report
| Variant | rs11241256 |
|---|---|
| Chromosome Location | chr5:113335230-113335231 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:3)
| rs_ID | r2[population] |
|---|---|
| rs10041389 | 0.80[ASN][1000 genomes] |
| rs4518384 | 0.82[ASN][1000 genomes] |
| rs728247 | 0.82[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv471042 | chr5:113160490-113440892 | Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
| 2 | esv2762537 | chr5:113324270-113335389 | Active TSS Enhancers | n/a | n/a | inside rSNPs | diseases |
| 3 | esv2763922 | chr5:113324270-113335389 | Active TSS Enhancers | n/a | n/a | inside rSNPs | diseases |
| 4 | nsv515486 | chr5:113327561-113335230 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 5 | nsv462397 | chr5:113327561-113335230 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 6 | nsv599417 | chr5:113327561-113335230 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 7 | nsv599418 | chr5:113327561-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 8 | nsv599419 | chr5:113327561-113339698 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 9 | nsv599422 | chr5:113330738-113335230 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 10 | nsv599423 | chr5:113330738-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 11 | nsv599427 | chr5:113330990-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 12 | nsv599428 | chr5:113331136-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 13 | nsv599429 | chr5:113331281-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 14 | nsv599430 | chr5:113331546-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| 15 | nsv599431 | chr5:113331616-113336598 | Enhancers | n/a | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:113335200-113336200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
