The 2.0 version of rSNPBase

Variant report

Variant rs112433879
Chromosome Location chr14:55797274-55797275
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55777200-55799000 Weak transcription Colon Smooth Muscle Colon
2 chr14:55777400-55799200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr14:55779200-55798800 Weak transcription K562 blood
4 chr14:55779200-55817600 Weak transcription Hela-S3 cervix
5 chr14:55779600-55799600 Weak transcription Rectal Smooth Muscle rectum
6 chr14:55779600-55801200 Weak transcription Esophagus oesophagus
7 chr14:55779800-55800800 Weak transcription Adipose Nuclei Adipose
8 chr14:55780000-55797800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr14:55780200-55807800 Weak transcription Thymus Thymus
10 chr14:55780600-55799000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr14:55780600-55800600 Weak transcription NHEK skin
12 chr14:55780600-55806200 Weak transcription HMEC breast
13 chr14:55780800-55799400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr14:55780800-55800800 Weak transcription Lung lung
15 chr14:55780800-55817200 Weak transcription Fetal Muscle Trunk muscle
16 chr14:55781400-55799600 Weak transcription NH-A brain
17 chr14:55782000-55817200 Weak transcription HSMM muscle
18 chr14:55783000-55798800 Weak transcription Liver Liver
19 chr14:55783200-55799400 Weak transcription Fetal Thymus thymus
20 chr14:55783400-55797400 Weak transcription Stomach Mucosa stomach
21 chr14:55783600-55799000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr14:55783600-55799400 Weak transcription Pancreas Pancrea
23 chr14:55783600-55800800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr14:55783800-55799400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr14:55784000-55799800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr14:55784200-55801200 Weak transcription Fetal Stomach stomach
27 chr14:55784600-55799400 Weak transcription HSMMtube muscle
28 chr14:55784600-55800800 Weak transcription Gastric stomach
29 chr14:55784800-55798800 Weak transcription Duodenum Mucosa Duodenum
30 chr14:55784800-55799600 Weak transcription Fetal Kidney kidney
31 chr14:55785800-55799000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr14:55785800-55799200 Weak transcription Primary hematopoietic stem cells blood
33 chr14:55786000-55798800 Weak transcription Fetal Intestine Large intestine
34 chr14:55786000-55799000 Weak transcription A549 lung
35 chr14:55786000-55799000 Weak transcription Dnd41 blood
36 chr14:55786800-55803000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr14:55787200-55798800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr14:55787200-55806600 Weak transcription Fetal Muscle Leg muscle
39 chr14:55787800-55798800 Weak transcription Fetal Intestine Small intestine
40 chr14:55788200-55797400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr14:55788600-55799400 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr14:55788800-55800800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr14:55790400-55806800 Weak transcription Aorta Aorta
44 chr14:55790800-55799400 Weak transcription Left Ventricle heart
45 chr14:55791800-55800200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr14:55791800-55817200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr14:55792600-55798800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr14:55792600-55799000 Enhancers Primary T helper cells fromperipheralblood blood
49 chr14:55793000-55808600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr14:55793200-55800800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015