Variant report

Variant	rs11250106
Chromosome Location	chr8:10849258-10849259
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10903336	0.86[AFR][1000 genomes]
rs28572202	0.86[AFR][1000 genomes]
rs28655990	0.86[AFR][1000 genomes]
rs60716942	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035072	chr8:10819444-11480692	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv539473	chr8:10819444-11480692	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10846800-10850200	Weak transcription	Right Atrium	heart
2	chr8:10848600-10850600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr8:10848600-10851200	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr8:10848800-10849800	Enhancers	Fetal Heart	heart
5	chr8:10849000-10850000	Enhancers	Pancreatic Islets	Pancreatic Islet
6	chr8:10849000-10850200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr8:10849200-10849600	Weak transcription	Brain Angular Gyrus	brain
8	chr8:10849200-10850000	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr8:10849200-10850600	Enhancers	HSMMtube	muscle
10	chr8:10849200-10850800	Weak transcription	Right Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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