Variant report

Variant rs11252223
Chromosome Location chr10:455766-455767
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:395800-489400 Weak transcription Stomach Mucosa stomach
2 chr10:418400-458400 Weak transcription Small Intestine intestine
3 chr10:421600-461800 Weak transcription A549 lung
4 chr10:423600-480200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr10:436600-459600 Weak transcription Colonic Mucosa Colon
6 chr10:436600-480200 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr10:436600-521200 Weak transcription HepG2 liver
8 chr10:436800-468000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr10:436800-469000 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr10:441000-459600 Weak transcription Esophagus oesophagus
11 chr10:441000-461800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr10:441600-466600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr10:443400-456600 Weak transcription HUVEC blood vessel
14 chr10:443400-497000 Weak transcription Psoas Muscle Psoas
15 chr10:444200-466000 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr10:445800-498400 Weak transcription Rectal Smooth Muscle rectum
17 chr10:448200-462200 Weak transcription H1 Cell Line embryonic stem cell
18 chr10:449600-456000 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr10:449600-456400 Strong transcription Adipose Nuclei Adipose
20 chr10:449600-458000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr10:449600-469200 Strong transcription Stomach Smooth Muscle stomach
22 chr10:450000-456400 Strong transcription Brain Inferior Temporal Lobe brain
23 chr10:450200-455800 Strong transcription Fetal Stomach stomach
24 chr10:450200-457200 Strong transcription Fetal Muscle Leg muscle
25 chr10:450200-458000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr10:450600-469800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr10:450600-469800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr10:451200-461800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr10:451800-459600 Weak transcription NHLF lung
30 chr10:452000-466200 Strong transcription Osteobl bone
31 chr10:452400-461400 Weak transcription Primary T cells fromperipheralblood blood
32 chr10:452600-455800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr10:452600-455800 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr10:452800-456800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr10:452800-457200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr10:453000-455800 Strong transcription Skeletal Muscle Female skeletal muscle
37 chr10:453000-457200 Strong transcription Ovary ovary
38 chr10:453000-459600 Weak transcription Placenta Amnion Placenta Amnion
39 chr10:453200-455800 Strong transcription NH-A brain
40 chr10:453200-456400 Strong transcription HSMM muscle
41 chr10:453200-462200 Strong transcription Liver Liver
42 chr10:453400-485600 Weak transcription Fetal Kidney kidney
43 chr10:453600-459600 Weak transcription Aorta Aorta
44 chr10:453600-468200 Weak transcription Spleen Spleen
45 chr10:453600-468400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr10:453600-469800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr10:453800-459600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr10:454000-456000 Enhancers Rectal Mucosa Donor 29 rectum
49 chr10:454200-461400 Weak transcription Muscle Satellite Cultured Cells --
50 chr10:454200-462800 Weak transcription Pancreatic Islets Pancreatic Islet

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