Variant report

Variant rs11252290
Chromosome Location chr10:461989-461990
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:395800-489400 Weak transcription Stomach Mucosa stomach
2 chr10:423600-480200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr10:436600-480200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr10:436600-521200 Weak transcription HepG2 liver
5 chr10:436800-468000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr10:436800-469000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr10:441600-466600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr10:443400-497000 Weak transcription Psoas Muscle Psoas
9 chr10:444200-466000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr10:445800-498400 Weak transcription Rectal Smooth Muscle rectum
11 chr10:448200-462200 Weak transcription H1 Cell Line embryonic stem cell
12 chr10:449600-469200 Strong transcription Stomach Smooth Muscle stomach
13 chr10:450600-469800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr10:450600-469800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr10:452000-466200 Strong transcription Osteobl bone
16 chr10:453200-462200 Strong transcription Liver Liver
17 chr10:453400-485600 Weak transcription Fetal Kidney kidney
18 chr10:453600-468200 Weak transcription Spleen Spleen
19 chr10:453600-468400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr10:453600-469800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr10:454200-462800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr10:454200-469800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr10:454800-465800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr10:455000-471800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr10:455000-480200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr10:455800-465200 Weak transcription Pancreas Pancrea
27 chr10:455800-468000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr10:456000-496600 Weak transcription Fetal Heart heart
29 chr10:456200-483200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr10:456600-469800 Strong transcription Fetal Stomach stomach
31 chr10:457600-466600 Strong transcription Ovary ovary
32 chr10:458000-469800 Strong transcription Adipose Nuclei Adipose
33 chr10:458200-464400 Weak transcription NHDF-Ad bronchial
34 chr10:458400-462400 Strong transcription Right Ventricle heart
35 chr10:458400-468800 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr10:458800-463400 Strong transcription Brain Germinal Matrix brain
37 chr10:458800-464400 Weak transcription Fetal Brain Male brain
38 chr10:458800-469800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr10:458800-470800 Weak transcription HSMM muscle
40 chr10:458800-471200 Weak transcription NH-A brain
41 chr10:459000-462200 Strong transcription Skeletal Muscle Male skeletal muscle
42 chr10:459000-462400 Strong transcription Fetal Lung lung
43 chr10:459000-463600 Genic enhancers Fetal Muscle Trunk muscle
44 chr10:459200-462000 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr10:459200-470000 Weak transcription Small Intestine intestine
46 chr10:459600-462200 Strong transcription Placenta Amnion Placenta Amnion
47 chr10:459600-465200 Strong transcription Brain Hippocampus Middle brain
48 chr10:459600-466800 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr10:459800-462000 Strong transcription HSMMtube muscle
50 chr10:459800-466800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain

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