Variant report

Variant rs11253246
Chromosome Location chr10:616610-616611
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:606600-618200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr10:609200-617600 Weak transcription Psoas Muscle Psoas
3 chr10:610800-616800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr10:612800-617200 Weak transcription Right Ventricle heart
5 chr10:612800-617400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr10:612800-617600 Weak transcription Left Ventricle heart
7 chr10:612800-617600 Weak transcription Right Atrium heart
8 chr10:612800-620200 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr10:613000-617600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr10:614000-617400 Weak transcription Gastric stomach
11 chr10:614200-617400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr10:614200-620400 Weak transcription Pancreas Pancrea
13 chr10:614200-621600 Weak transcription Ovary ovary
14 chr10:614400-617400 Weak transcription Brain Substantia Nigra brain
15 chr10:616000-616800 ZNF genes & repeats Spleen Spleen
16 chr10:616000-618200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
17 chr10:616000-621800 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr10:616200-616800 Enhancers Fetal Kidney kidney
19 chr10:616200-617000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
20 chr10:616200-617000 Enhancers Rectal Smooth Muscle rectum
21 chr10:616200-617000 Enhancers NHDF-Ad bronchial
22 chr10:616200-618000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr10:616200-619000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr10:616200-622600 Enhancers Brain Inferior Temporal Lobe brain
25 chr10:616200-643800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr10:616400-617200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr10:616400-617800 Flanking Active TSS Colon Smooth Muscle Colon
28 chr10:616400-618200 Enhancers Fetal Muscle Trunk muscle
29 chr10:616400-618200 Flanking Active TSS Stomach Smooth Muscle stomach
30 chr10:616400-618400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr10:616400-619000 Enhancers Fetal Muscle Leg muscle
32 chr10:616400-619400 Enhancers Brain Cingulate Gyrus brain
33 chr10:616400-619400 Enhancers Placenta Amnion Placenta Amnion
34 chr10:616400-623600 Enhancers Brain Hippocampus Middle brain
35 chr10:616600-616800 Weak transcription H1 Cell Line embryonic stem cell
36 chr10:616600-616800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr10:616600-616800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
38 chr10:616600-616800 Weak transcription Fetal Stomach stomach
39 chr10:616600-617400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr10:616600-619400 Enhancers Fetal Lung lung
41 chr10:616600-620000 Enhancers Fetal Brain Male brain
42 chr10:616600-621400 Weak transcription Fetal Intestine Small intestine
43 chr10:616600-621800 Enhancers Brain Anterior Caudate brain
44 chr10:616600-621800 Weak transcription Esophagus oesophagus
45 chr10:616600-622600 Enhancers Brain Angular Gyrus brain

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