Variant report

Variant	rs112634477
Chromosome Location	chr6:37235128-37235129
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:37233977..37239267-chr6:37239299..37244981,7	K562	blood:
2	chr6:37233688..37235213-chr6:37235258..37237501,2	K562	blood:
3	chr6:37233637..37237565-chr6:37239299..37242828,5	K562	blood:
4	chr6:37233393..37235941-chr6:37252690..37254296,2	K562	blood:
5	chr6:37221803..37229301-chr6:37229686..37238425,11	K562	blood:

Variant related genes	Relation type
ENSG00000065491	Chromatin interaction
ENSG00000172738	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425271	chr6:37234374-37236422	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv3403324	chr6:37234774-37236022	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:118 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37226400-37244000	Weak transcription	Gastric	stomach
2	chr6:37226400-37247200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:37226400-37250400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:37226600-37237000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr6:37226600-37237400	Weak transcription	Placenta	Placenta
6	chr6:37226600-37237400	Weak transcription	HSMM	muscle
7	chr6:37226600-37240200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr6:37226600-37240200	Weak transcription	Aorta	Aorta
9	chr6:37226600-37243000	Weak transcription	Pancreas	Pancrea
10	chr6:37226600-37247200	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr6:37226600-37247200	Weak transcription	Esophagus	oesophagus
12	chr6:37226600-37250000	Weak transcription	Rectal Smooth Muscle	rectum
13	chr6:37226600-37259400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr6:37226800-37237400	Weak transcription	NHDF-Ad	bronchial
15	chr6:37226800-37247000	Weak transcription	HSMMtube	muscle
16	chr6:37227000-37236800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr6:37227000-37237000	Weak transcription	Fetal Muscle Trunk	muscle
18	chr6:37227000-37247200	Weak transcription	Right Atrium	heart
19	chr6:37227000-37250000	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr6:37227200-37237200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr6:37227200-37237400	Weak transcription	Brain Hippocampus Middle	brain
22	chr6:37227200-37238400	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr6:37227200-37241400	Weak transcription	Colon Smooth Muscle	Colon
24	chr6:37227200-37247200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr6:37227200-37247200	Weak transcription	Brain Substantia Nigra	brain
26	chr6:37227200-37247200	Weak transcription	NHLF	lung
27	chr6:37227200-37250200	Weak transcription	Brain Angular Gyrus	brain
28	chr6:37227400-37235600	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr6:37227400-37235800	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr6:37227400-37236000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr6:37227400-37236600	Weak transcription	Primary T cells fromperipheralblood	blood
32	chr6:37227400-37237000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr6:37227400-37237000	Weak transcription	Osteobl	bone
34	chr6:37227400-37237200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
35	chr6:37227400-37237400	Weak transcription	NH-A	brain
36	chr6:37227400-37237600	Weak transcription	Stomach Smooth Muscle	stomach
37	chr6:37227400-37238400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr6:37227400-37238400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr6:37227400-37238400	Weak transcription	A549	lung
40	chr6:37227400-37239000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr6:37227400-37240200	Weak transcription	Psoas Muscle	Psoas
42	chr6:37227400-37240400	Weak transcription	Brain Anterior Caudate	brain
43	chr6:37227400-37241400	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr6:37227400-37247000	Weak transcription	HMEC	breast
45	chr6:37227400-37247400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr6:37227400-37247600	Weak transcription	Brain Cingulate Gyrus	brain
47	chr6:37227600-37237400	Weak transcription	Primary B cells from peripheral blood	blood
48	chr6:37227600-37241000	Weak transcription	Fetal Kidney	kidney
49	chr6:37227800-37237000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr6:37227800-37237600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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